tophat-recondition | TopHat unmapped.bam files

by cbrueffer Python Version: Current License: Non-SPDX

X-Ray Key Features Code Snippets Community Discussions Vulnerabilities Install Support

kandi X-RAY | tophat-recondition Summary

tophat-recondition is a Python library typically used in Telecommunications, Media, Advertising, Marketing applications. tophat-recondition has no bugs, it has no vulnerabilities and it has low support. However tophat-recondition build file is not available and it has a Non-SPDX License. You can download it from GitHub.

Post-processor for TopHat unmapped.bam files making them useable by downstream software.

Support

Quality

Security

License

Reuse

Support

tophat-recondition has a low active ecosystem.

It has 9 star(s) with 5 fork(s). There are 5 watchers for this library.

It had no major release in the last 6 months.

There are 1 open issues and 1 have been closed. On average issues are closed in 15 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of tophat-recondition is current.

Quality

tophat-recondition has no bugs reported.

Security

tophat-recondition has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

tophat-recondition has a Non-SPDX License.

Non-SPDX licenses can be open source with a non SPDX compliant license, or non open source licenses, and you need to review them closely before use.

Reuse

tophat-recondition releases are not available. You will need to build from source code and install.

tophat-recondition has no build file. You will be need to create the build yourself to build the component from source.

Installation instructions are not available. Examples and code snippets are available.

Top functions reviewed by kandi - BETA

kandi has reviewed tophat-recondition and discovered the below as its top functions. This is intended to give you an instant insight into tophat-recondition implemented functionality, and help decide if they suit your requirements.

Fix unmapped reads
Performs unmapped with unmapped mates
Unmapped read
Convert mapped file to unmapped tid
Return the position of a read
Add a file handler to the logger
Prints statistics about fix correction
Add console handler to logger

Get all kandi verified functions for this library.

tophat-recondition Key Features

No Key Features are available at this moment for tophat-recondition.

tophat-recondition Examples and Code Snippets

No Code Snippets are available at this moment for tophat-recondition.

Community Discussions

No Community Discussions are available at this moment for tophat-recondition.Refer to stack overflow page for discussions.

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install tophat-recondition

You can download it from GitHub.
You can use tophat-recondition like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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