dgl | Python package built to ease deep learning | Machine Learning library
kandi X-RAY | dgl Summary
kandi X-RAY | dgl Summary
Website | A Blitz Introduction to DGL | Documentation (Latest | Stable) | Official Examples | Discussion Forum | Slack Channel. DGL is an easy-to-use, high performance and scalable Python package for deep learning on graphs. DGL is framework agnostic, meaning if a deep graph model is a component of an end-to-end application, the rest of the logics can be implemented in any major frameworks, such as PyTorch, Apache MXNet or TensorFlow. Figure: DGL Overall Architecture.
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Top functions reviewed by kandi - BETA
- Draw networkx edges .
- Reorder a graph .
- Create a DGLGraph from a list of graphs .
- Convert a graph into a block .
- Convert a directed graph into homogeneous edges .
- Create a bipartite from a NetworkX graph .
- Create a block device .
- Random walk function .
- Partition the graph .
- Compute the RPN algorithm .
dgl Key Features
dgl Examples and Code Snippets
import dgl
ds = dgl.data.CSVDataset('/path/to/dataset')
# A demonstration of how to use the loaded dataset. The feature names
# may vary depending on the CSV contents.
g = ds[0] # get the graph
label = g.ndata['label']
feat = g.ndata['feat']
.. co
在介绍DGL中邻居采样的用法之前,这里先解释一下邻居采样的工作原理。下文继续使用上述的例子。
首先定义一个如上图所示的DGLGraph。
.. code:: python
import torch
import dgl
src = torch.LongTensor(
[0, 0, 0, 1, 2, 2, 2, 3, 3, 4, 4, 5, 5, 6, 7, 7, 8, 9, 10,
1, 2, 3, 3, 3, 4, 5, 5,
You can use the
:ref:`same neighborhood samplers as node classification `.
.. code:: python
sampler = dgl.dataloading.MultiLayerFullNeighborSampler(2)
To use the neighborhood sampler provided by DGL for edge classification,
one need to instea
import dgl
import numpy as np
from heapq import heappush, heappop, heapify, nsmallest
from copy import deepcopy
# We use lapjv implementation (https://github.com/src-d/lapjv) to solve assignment problem, because of its scalability
# Also see https:/
import argparse
import datetime
import os
import sys
import time
import dgl
import torch
from dgl.data.utils import load_graphs, save_graphs
from dgl.dataloading import GraphDataLoader
from ogb.linkproppred import DglLinkPropPredDataset, Evaluator
f
import argparse
import math
import os
import random
import sys
import time
import numpy as np
import torch
import torch.nn.functional as F
from ogb.linkproppred import DglLinkPropPredDataset, Evaluator
from scipy.sparse.csgraph import shortest_path
u(t) = A*exp(t)+B*exp(-t)
v(t) = (A*exp(t)-B*exp(-t))/(A*exp(t)+B*exp(-t))
A = D*exp(-C), B = D*exp(C) ==> v(t) = tanh(t-C)
A = D*exp(-C), B =-D*exp(C) ==> v(t) = ctgh(t-C)
ctgh(t-C
import networkx as nx
import dgl
G = nx.DiGraph()
G.add_edges_from([(0, 1), (1, 2), (2, 3)])
G.nodes[0]["weight"] = 0
G.nodes[1]["weight"] = 10
G.nodes[2]["weight"] = 20
G.nodes[3]["weight"] = 30
dgl.from_networkx(G, node_attrs=["weight"
import numpy as np
import dgl
import networkx as nx
def numpy_to_graph(A,type_graph='dgl',node_features=None):
'''Convert numpy arrays to graph
Parameters
----------
A : mxm array
Adjacency matrix
type_graph :
class summation:
def __init__(self, f, s):
self.first = f
self.second = s
@property
def summ(self):
return self.first+self.second
s = summation(1,9)
print(s.summ)
# 10
s.firs
Community Discussions
Trending Discussions on dgl
QUESTION
I am trying to solve the ODE of the frictional free fall:
...ANSWER
Answered 2022-Apr-01 at 19:28The sympy answer is formally correct, with v=u'/u
one gets u''=u
so that
QUESTION
When I want to convert my networkx Graph to dgl library I get this error
...ANSWER
Answered 2022-Mar-17 at 10:27I was trying different things in different two days. I couldn't solve in this function directly but I have workarounds and I have suspicion why it is not working.
What can cause to this problem:
- If some nodes doesn't have this feature
- Maybe edges have different nodes which doesn't appear in nodes list so It adds automatically These are my suspicions I don't know a lot about Dgl for now.
How I fixed this:
QUESTION
Edit: apparently DGL is working on it already: https://github.com/dmlc/dgl/pull/3641
I have several types of embeddings and each one needs its own linear projection. I can solve the problem with a for loop of type:
...ANSWER
Answered 2022-Feb-07 at 17:09Just found out that DGL is working on this feature already: https://github.com/dmlc/dgl/pull/3641
QUESTION
Consider the following toy networkx graph:
...ANSWER
Answered 2022-Jan-21 at 18:12From the dgl doc here, it looks like node_attrs
should be a list of attribute names. So if you change dgl.from_networkx(G, node_attrs="weight")
to
dgl.from_networkx(G, node_attrs=["weight"])
, you will get the result you want.
See code below:
QUESTION
I was wondering if anyone could help me with this problem that has been plaguing me.
I am currently using Qt Creator with verion 5.11.3 Qt on Ubuntu to build a project. Every time I try to build I get the error "gl.h: No such file or directory".
The error occurs next to the line in my code that says "#include
I have ran the following code as well and it did not change the outcome
...ANSWER
Answered 2021-Jul-26 at 18:58Install the OpenGL dev support:
QUESTION
Im trying to run a simulation and create points as structs. I now want to store them in an array and tried to use a pointer on that array. When i run the programm, it just randomly gives me a wrong output. I suspect there is something wrong with the pointer "Point *Point" or the use of the malloc() funtion. when Im changing things it only gets worse and the programm doesnt even finish and gives me this error code: Process returned -1073741819 (0xC0000005)
I'd very happy if someone knew why its failing :)
This is my code
...ANSWER
Answered 2021-Jul-14 at 22:14Don't name your pointer variable the same as the type Point
.
Example:
QUESTION
I need to add each element of the array to the Dialog menu. The problem is that with the command $ {array [@]} the dialog is recognizing each word as an element. Look:
First attempt: Adding element with spaces
...ANSWER
Answered 2021-Feb-21 at 15:31Made all necessary changes to your code so it now works as expected.
QUESTION
Generate a graph object (either DGL or NetworkX) from an Adjacency matrix and allow for node features to be established.
ResultI generate my solution below. However, other answers are encouraged.
...ANSWER
Answered 2021-Feb-10 at 21:50QUESTION
Is there any difference between the following two codes related to initializing a class in Python?
...ANSWER
Answered 2021-Feb-02 at 18:45No. there is no difference between these two approaches in your case with this level of information. but could they? Yes. they could. if they have some modifications in their setters or getters. later in my answer I'll show you how.
First of all, I prefer using this one:
QUESTION
I am working on graph classification problem based on molecules. My data is SMILES, and I want to convert it into graph and build model using DGL package.
I have installed the dgl package by using pip install dgl in spyder and ! pip install dgl in google colab. I can import this package by using import dgl, but when I use from dgl.data.chem import mol_to_bigraph, smiles_to_bigraph, it gives me this error:
No module named 'dgl.data.chem'
What is the problem here? Does anyone have experience fixing this error? Thanks.
...ANSWER
Answered 2020-Sep-26 at 05:22I'm not sure if the chem dataset exists. I installed the dgl package and it's not in the dgl/data directory that I can see. I also don't see it in the dgl docs.
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
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Install dgl
Experience state-of-the-art GNN models in only two command-lines using DGL-Go.
Learn DGL by example implementations of popular GNN models.
Read the User Guide (中文版链接), which explains the concepts and usage of DGL in much more details.
Go through the tutorials for advanced features like stochastic training of GNNs, training on multi-GPU or multi-machine.
Study classical papers on graph machine learning alongside DGL.
Search for the usage of a specific API in the API reference manual, which organizes all DGL APIs by their namespace.
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