PyTorch-BigGraph | Generate embeddings from large-scale graph-structured data | Machine Learning library
kandi X-RAY | PyTorch-BigGraph Summary
kandi X-RAY | PyTorch-BigGraph Summary
PyTorch-BigGraph (PBG) is a distributed system for learning graph embeddings for large graphs, particularly big web interaction graphs with up to billions of entities and trillions of edges. PBG was introduced in the PyTorch-BigGraph: A Large-scale Graph Embedding Framework paper, presented at the SysML conference in 2019. PBG trains on an input graph by ingesting its list of edges, each identified by its source and target entities and, possibly, a relation type. It outputs a feature vector (embedding) for each entity, trying to place adjacent entities close to each other in the vector space, while pushing unconnected entities apart. Therefore, entities that have a similar distribution of neighbors will end up being nearby. It is possible to configure each relation type to calculate this "proximity score" in a different way, with the parameters (if any) learned during training. This allows the same underlying entity embeddings to be shared among multiple relation types. The generality and extensibility of its model allows PBG to train a number of models from the knowledge graph embedding literature, including TransE, RESCAL, DistMult and ComplEx.
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Top functions reviewed by kandi - BETA
- Perform a single training step
- Append a tensor to the buffer
- Flushes buffered data to the dataset
- Return the average statistics
- Converts input data into entities
- Collect relation types from edge files
- Given a list of entity types return a mapping of entities to entities
- Generates edge files from the edge storage
- Extract a gzipped file
- Read data from file
- Start the server
- Map a schema to a schema
- Adjusts the score of the edges
- Builds TSV for the given model
- Get the number of partitioned entities
- Concatenate a list of edge lists
- Parse a partial config dictionary
- Thread loop loop
- Performs a single step
- Acquire a bucket for the given rank
- Store a key in the store
- Get a value from the server
- Run a partition server
- Shuffle a random split
- Run the worker thread
- Download url to root
PyTorch-BigGraph Key Features
PyTorch-BigGraph Examples and Code Snippets
Community Discussions
Trending Discussions on PyTorch-BigGraph
QUESTION
After struggling with this amazing facebookresearch / PyTorch-BigGraph project, and its impossible API, I managed to get a grip on how to run it (thanks to stand alone simple example)
My system restrictions do not allow me to train the dense (embedding) representation of all edges, and I need from time to time to upload past embeddings and train the model using both new edges and existing nodes, notice that nodes in past and new edge list do not necessarily overlap.
I tried to understand from here: see the context section how to do it, so far with no success.
Following is a stand-alone PGD code, that turned batch_edges
into an embedding node list, however, I need it to use pre-trained nodes list past_trained_nodes
.
ANSWER
Answered 2020-Oct-29 at 12:28Since torchbiggraph
is file based, you can modify the saved files to load pre-trained embeddings and add new nodes. I wrote a function to achieve this
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
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Install PyTorch-BigGraph
The results of the paper can easily be reproduced by running the following command (which executes this script):. This will download the Freebase 15k knowledge base dataset, put it into the right format, train on it using the ComplEx model and finally perform an evaluation of the learned embeddings that calculates the MRR and other metrics that should match the paper. Another command, torchbiggraph_example_livejournal, does the same for the LiveJournal interaction graph dataset. To learn how to use PBG, let us walk through what the FB15k script does.
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