uv | Finding prophage regions in bacterial genomes using brute

by phiweger Python Version: Current License: No License

X-Ray Key Features Code Snippets Community Discussions(10)Vulnerabilities Install Support

kandi X-RAY | uv Summary

uv is a Python library. uv has no bugs, it has no vulnerabilities and it has low support. However uv build file is not available. You can download it from GitHub.

In the lab, temperate phages (intact prophages) can be induced with UV light, which makes them leave their host's genome and enter in a lytic life cycle. And just as this uncovers (pro)phages using brute physical force, uv uncovers them using brute data force.

Support

Quality

Security

License

Reuse

Support

uv has a low active ecosystem.

It has 16 star(s) with 1 fork(s). There are 1 watchers for this library.

It had no major release in the last 6 months.

There are 7 open issues and 2 have been closed. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of uv is current.

Quality

uv has no bugs reported.

Security

uv has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

uv does not have a standard license declared.

Check the repository for any license declaration and review the terms closely.

Without a license, all rights are reserved, and you cannot use the library in your applications.

Reuse

uv releases are not available. You will need to build from source code and install.

uv has no build file. You will be need to create the build yourself to build the component from source.

Installation instructions are not available. Examples and code snippets are available.

Top functions reviewed by kandi - BETA

kandi has reviewed uv and discovered the below as its top functions. This is intended to give you an instant insight into uv implemented functionality, and help decide if they suit your requirements.

Return a set of names found in the query
Generate a Sourmash signature
Load a networkx graph
Load coordinates from a Prodigal file
Count the number of hits in each prodigal frame
Given a sequence of counts and a contig based on a contig
Return a string representation of a node
Translates a nt
Reconstruct the contig of the header
Normalize a vector
Load contig names from a file

Get all kandi verified functions for this library.

uv Key Features

No Key Features are available at this moment for uv.

uv Examples and Code Snippets

No Code Snippets are available at this moment for uv.

Community Discussions

Trending Discussions on uv

How to fix printing unknown symbols in cpp?

pyglet gives error regarding GLSL version

Trying to access json array data with php

Problem resolving an android.content.res.Resources error

Monitor services in azure

Unity - Project a texture on a mesh using C# (No Shaders)

ffmpeg x11grab to streamable format

Is there a way to loop through JSON data and display it in HTML

Compositing colors and textures in webgl

Is there a way to only print part of a JSON string in JavaScript

QUESTION

How to fix printing unknown symbols in cpp?

Asked 2021-Jun-11 at 14:08

I'm trying to print a Sorted List and it looks like the list itself is correct- by printing the inner results, but when I try to print the whole list it shows some weird symbols and crashes. Where am I wrong? This is my main with the function I'm calling in "apply":

...

ANSWER

Answered 2021-Jun-11 at 14:08

This line:

Source https://stackoverflow.com/questions/67938330

QUESTION

pyglet gives error regarding GLSL version

Asked 2021-Jun-08 at 07:05

I am trying to run a code that has a GUI built with pyglet. but it gives this error. I have searched and found that I need to directly set the version of GLSL to be used by the code but I don't know how. would be happy if you helped me out with it.

...

ANSWER

Answered 2021-Jun-08 at 07:05

well it got solved! just needed to add the directive #version 120 at the beginning of the shader like this:

Source https://stackoverflow.com/questions/67856810

QUESTION

Trying to access json array data with php

Asked 2021-Jun-06 at 16:42

I am trying to reduce the amount of data returned from my php curl request to just that which is necessary but am struggling to access the data from the inner arrays/objects.

I'm currently receiving an error that the indexes within the $weatherdata are undefined.

Warning: Illegal string offset 'current' in projectname on line 21

This is the data that's returned:

...

ANSWER

Answered 2021-Jun-06 at 16:42

Your foreach is causing this error. You are looping through the resulting array

When you decode the above json using json_decode($result, true), the resulting array would be like

Source https://stackoverflow.com/questions/67861032

QUESTION

Problem resolving an android.content.res.Resources error

Asked 2021-Jun-04 at 16:09

I understand that this error has been addressed severally and I've checked most of them like Android: android.content.res.Resources$NotFoundException: String resource ID #0x5, android.content.res.Resources$NotFoundException: String resource ID to see if I could find a solution to my problem but I couldn't and most of them are hard to understand. I can't tell if my code is an int/string so I don't know exactly what to correct, so I need help.

I got this error at runtime:

...

ANSWER

Answered 2021-Feb-06 at 20:25

android.content.res.Resources$NotFoundException: String resource ID #0x601ee924
        at android.content.res.Resources.getText(Resources.java:348)
        at android.widget.TextView.setText(TextView.java:5848)
        at com.tex.lightweatherforecast.Activity.HomeActivity$1.onResponse(HomeActivity.java:66)

Source https://stackoverflow.com/questions/66080872

QUESTION

Monitor services in azure

Asked 2021-Jun-04 at 14:00

The error message is:

There are some problems with the configuration, described below. The Terraform configuration must be valid before initialization so that Terraform can determine which modules and providers need to be installed.

Here's what I'm doing:

Written a terraform script in azvm.tf to create a VM.
Defined the variables resourcegroup, location, and pub_key in the variables.tf file, and call those variables in the azvm.tf file using string interpolation syntax.
Created a VM with the following features:

a) Ubuntu 18.04 server b) VM name : any custom name
c) Admin_username : Any custom name
d) disable password authentication
e) size : Standard DS1_v2
f) Allow traffic for ssh, http, https
g) use public ssh key generated in the above step

With help of vi command we created variables.tf file as:

...

ANSWER

Answered 2021-Jun-04 at 14:00

So as mentioned above, you're using a mix of Terraform and Az CLI here - this is not right. You should use one or the other.

It seems you've been tasked to create a Linux VM using Terraform. You need a 'main' Terraform file for your main code/terraform objects and then a 'variable' Terraform file for your variables. Technically, Terraform will flatten every Terraform file that are in the same directory when you do a Terraform init/plan - this means you could put everything in just one single .tf file.

However, for the purpose of the tutorial, it's a good practice to split both so they can be managed easily. This is the Terraform code that you would want to use - it will help you create a Linux VM.

For simplicity, I'm putting a sample here that links back to the variables in your variables.tf

Source https://stackoverflow.com/questions/67827029

QUESTION

Unity - Project a texture on a mesh using C# (No Shaders)

Asked 2021-Jun-02 at 16:50

I'm trying to project a texture on a simple cube meshFilter using only C# but I'm having a bit of a hard time understanding what to do. I almost got it working for the X axis rotation and there is a lot of bad warping for Y/Z. Basically, I update the UVs when the position/rotation of the camera changes, here is my code :

...

ANSWER

Answered 2021-Jun-02 at 16:50

I found a solution which solves the problem completely but I guess it is not mathematically correct since I don't really know much about matrixes and projections. It is however a good starting point for whoever wants to do something similar without any experience.

Before showing the code, some things you should setup in order to make it easier to debug potential problems :

Make sure your texture is in clamp mode, it will be easier to see if the projection works correctly.
Position your object at (0,0,0).
Position your camera at (0,0,0) and make sure it is in perspective mode.
Use another camera in orthographic mode to look at the projected texture and validate it is shown correctly.

The algorithm :

Source https://stackoverflow.com/questions/67780954

QUESTION

ffmpeg x11grab to streamable format

Asked 2021-Jun-02 at 03:01

2 FFMPEG process

(1) generating a ffmpeg x11grab to a .mp4 (2) take the .mp4 and restream it simultaneously to multiple rtmp endpoints

ISSUE the generated file in (1) have this error "moov atom not found"

This is the command that generate (1) :

...

ANSWER

Answered 2021-Jun-02 at 03:01

With those changes, I'm able to acheive 3 to 4 stable delay ;)

LINE 79 of

https://github.com/OpenVidu/openvidu/blob/master/openvidu-server/docker/openvidu-recording/scripts/composed.sh

I REPLACED

Source https://stackoverflow.com/questions/66837454

QUESTION

Is there a way to loop through JSON data and display it in HTML

Asked 2021-May-28 at 13:28

I am trying to great a weather app using The Weather API. I have managed to get the information that I need from the JSON and display it in HTML.

I would not like to get the hourly weather from the JSON and display it from each hour. I thought about doing this within a loop and displaying it that way but am unsure how to write it.

Here is the JSON

...

ANSWER

Answered 2021-May-27 at 10:14

Try JSON.parse using the reviver parameter - https://developer.mozilla.org/en-US/docs/Web/JavaScript/Reference/Global_Objects/JSON/parse#using_the_reviver_parameter

Source https://stackoverflow.com/questions/67719328

QUESTION

Compositing colors and textures in webgl

Asked 2021-May-26 at 20:45

How to do color compositing in webgl? I am not sure what to search for exactly maybe I am missing a word. I want to be able to draw a color or texture as overlay. For example, here I tried to add black overlay with 0.2 opacity but instead of using color directly I am substracting opacity. If I want to use different color as overlay, I will have to use different work around for it. How can I overlay/composite different colors or textures without using any work around? Shadertoy link

...

ANSWER

Answered 2021-May-26 at 20:45

If you want to darken the texture color towards black, you could use a simple multiplication:

Source https://stackoverflow.com/questions/67711916

QUESTION

Is there a way to only print part of a JSON string in JavaScript

Asked 2021-May-25 at 11:45

I have JSON data which I have gotten from weather api. Within the data I would like to be able to display the weather for each hour.

...

ANSWER

Answered 2021-May-25 at 11:45

The simplest solution would be to split on blank sign

basic example:

Source https://stackoverflow.com/questions/67687181

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install uv

You can download it from GitHub.
You can use uv like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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