imbalanced-learn | A Python Package to Tackle the Curse of Imbalanced Datasets in Machine Learning
kandi X-RAY | imbalanced-learn Summary
kandi X-RAY | imbalanced-learn Summary
A Python Package to Tackle the Curse of Imbalanced Datasets in Machine Learning
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Top functions reviewed by kandi - BETA
- Create a classification report
- R Sensitivity support
- Decorator to make an index balanced scoring
- Calculate geometric mean squared error
- Generate an imbalanced dataset
- Construct a sampling strategy dictionary
- Check the sampling strategy
- Calculate sampling strategy
- Check if the given classifier has the correct classification
- Simulate an imbalanced dataset
- Plot scatter plot
- Default sampling strategy
- Return the sampling strategy for the given sampling type
- Fits a balanced Batch model
- Make a marginal plot
- Plot the decision function
- Returns the sampling strategy for each class
- Return a function to resolve linkcode
- Checks the sampler to fit the sampler
- Create a classification dataset
- Returns the sampling strategy for the given sampling type
- Import keras module
- Parametrize estimator
- Checks if noise is in danger noise
- Decorator to make a scoring function
- Calculate geometric mean squared error score
- Fetch datasets from Zenodo
imbalanced-learn Key Features
imbalanced-learn Examples and Code Snippets
Lines of Code : 37License : Strong Copyleft (GPL-3.0)
Copyfrom imblearn.pipeline import Pipeline
from sklearn.datasets import load_breast_cancer
from sklearn.metrics import accuracy_score
from sklearn.model_selection import train_test_split
from sklearn.tree import DecisionTreeClassifier
from evopreprocess. """
==============================
Compare over-sampling samplers
==============================
The following example attends to make a qualitative comparison between the
different over-sampling algorithms available in the imbalanced-learn package. """
===============================
Compare under-sampling samplers
===============================
The following example attends to make a qualitative comparison between the
different under-sampling algorithms available in the imbalanced-learn pack """
==========================================================
Fitting model on imbalanced datasets and how to fight bias
==========================================================
This example illustrates the problem induced by learning on datasets Community Discussions
Trending Discussions on imbalanced-learn
QUESTION
My code is:
...ANSWER
Answered 2022-Mar-24 at 14:44I think, you're looking at the wrong documentation. That one is for version 0.3.0-dev, so I checked: https://imbalanced-learn.org/stable/references/generated/imblearn.under_sampling.TomekLinks.html -- this parameter has been deprecated in a newer version 0.9.0.
Also as the documentation goes, seems you have to specify it in make_classification function as below:
QUESTION
I already referred these two posts:
Please don't mark this as a duplicate.
I am trying to get the feature names from a bagging classifier (which does not have inbuilt feature importance).
I have the below sample data and code based on those related posts linked above
...ANSWER
Answered 2022-Mar-19 at 12:08You could call the load_iris function without any parameters, this way the return of the function will be a Bunch object (dictionary-like object) with some attributes. The most relevant, for your use case, would be bunch.data (feature matrix), bunch.target and bunch.feature_names.
QUESTION
I already referred the posts here, here and here. Don't mark it as duplicate.
I am working on a binary classification problem where my dataset has categorical and numerical columns.
However, some of the categorical columns has a mix of numeric and string values. Nontheless, they only indicate the category name.
For instance, I have a column called biz_category which has values like A,B,C,4,5 etc.
I guess the below error is thrown due to values like 4 and 5.
Therefore, I tried the belowm to convert them into category datatype. (but still it doesn't work)
ANSWER
Answered 2022-Feb-20 at 14:22SMOTE requires the values in each categorical/numerical column to have uniform datatype. Essentially you can not have mixed datatypes in any of the column in this case your biz_category column. Also merely casting the column to categorical type does not necessarily mean that the values in that column will have uniform datatype.
One possible solution to this problem is to re-encode the values in those columns which have mixed data types for example you could use lableencoder but I think in your case simply changing the dtype to string would also work.
QUESTION
I have an Azure ML Workspace which comes by default with some pre-installed packages.
I tried to install
...ANSWER
Answered 2022-Feb-15 at 14:23scikit-learn 1.0.1 and up require Python >= 3.7; you use Python 3.6. You need to upgrade Python or downgrade imbalanced-learn. imbalanced-learn 0.8.1 allows Python 3.6 so
QUESTION
I want to download a UNIX python wheel into my windows PC, for later install it in a UNIX server with no access to the internet
I tried
...ANSWER
Answered 2022-Feb-09 at 12:20Use --platform ?
On my Ubuntu x86_64 :
QUESTION
I am trying to install conda on EMR and below is my bootstrap script, it looks like conda is getting installed but it is not getting added to environment variable. When I manually update the $PATH variable on EMR master node, it can identify conda. I want to use conda on Zeppelin.
I also tried adding condig into configuration like below while launching my EMR instance however I still get the below mentioned error.
...ANSWER
Answered 2022-Feb-05 at 00:17I got the conda working by modifying the script as below, emr python versions were colliding with the conda version.:
QUESTION
I am trying to run AI Fairness 360 metrics on skit-learn (imbalanced-learn) algorithms, but I have a problem with my code. The problem is when I apply skit-learn (imbalanced-learn) algorithms like SMOTE, it return a numpy array. While AI Fairness 360 preprocessing methods return BinaryLabelDataset. Then the metrics should receive an object from BinaryLabelDataset class. I am stuck in how to convert my arrays to BinaryLabelDataset to be able to use measures.
My preprocessing algorithm needs to receive X,Y. So, I split the dataset before calling SMOTE method into X and Y. The dataset before using SMOTE was standard_dataset and it was ok to use metrics, but the problem after I used SMOTE method because it converts data to numpy array.
I got the following error after running the code :
...ANSWER
Answered 2021-Sep-21 at 17:34You are correct that the problem is with y_pred. You can concatenate it to X_test, transform it to a StandardDataset object, and then pass that one to the BinaryLabelDatasetMetric. The output object will have the methods for calculating different fairness metrics. I do not know how your dataset looks like, but here is a complete reproducible example that you can adapt to do this process for your dataset.
QUESTION
I'm trying to install conda environment using the command:
...ANSWER
Answered 2021-Dec-22 at 18:02This solves fine (), but is indeed a complex solve mainly due to:
- underspecification
- lack of modularization
This particular environment specification ends up installing well over 300 packages. And there isn't a single one of those that are constrained by the specification. That is a huge SAT problem to solve and Conda will struggle with this. Mamba will help solve faster, but providing additional constraints can vastly reduce the solution space.
At minimum, specify a Python version (major.minor), such as python=3.9. This is the single most effective constraint.
Beyond that, putting minimum requirements on central packages (those that are dependencies of others) can help, such as minimum NumPy.
Lack of ModularizationI assume the name "devenv" means this is a development environment. So, I get that one wants all these tools immediately at hand. However, Conda environment activation is so simple, and most IDE tooling these days (Spyder, VSCode, Jupyter) encourages separation of infrastructure and the execution kernel. Being more thoughtful about how environments (emphasis on the plural) are organized and work together, can go a long way in having a sustainable and painless data science workflow.
The environment at hand has multiple red flags in my book:
conda-buildshould be in base and only in basesnakemakeshould be in a dedicated environmentnotebook(i.e., Jupyter) should be in a dedicated environment, co-installed withnb_conda_kernels; all kernel environments need areipykernel
I'd probably also have the linting/formatting packages separated, but that's less an issue. The real killer though is snakemake - it's just a massive piece of infrastructure and I'd strongly encourage keeping that separated.
QUESTION
data source: https://catalog.data.gov/dataset/nyc-transit-subway-entrance-and-exit-data
I tried looking for a similar problem but I can't find an answer and the error does not help much. I'm kinda frustrated at this point. Thanks for the help. I'm calculating the closest distance from a point.
...ANSWER
Answered 2021-Oct-11 at 14:21geopandas 0.10.1
- have noted that your data is on kaggle, so start by sourcing it
- there really is only one issue
shapely.geometry.MultiPoint()constructor does not work with a filtered series. Pass it a numpy array instead and it works. - full code below, have randomly selected a point to serve as
gpdPoint
QUESTION
I want to deploy a machine learning model and have the environment yml file and the model pickle file. When I include scikit-learn=0.23.2 to the dependencies, conda automatically uninstall this scikit-learn version and install scikit-learn-0.24.2 . Therefore, I get the following warning when I load the pickle file.
UserWarning: Trying to unpickle estimator DecisionTreeClassifier from version 0.23.2 when using version 0.24.2. This might lead to breaking code or invalid results. Use at your own risk.
Here is the environment:
...ANSWER
Answered 2021-Aug-13 at 16:38Whatever is in the pip: section of a Conda environment YAML gets installed after the Conda environment is created, and is run with the pip install -U command. The -U gives Pip the permission to upgrade any existing packages if it is necessary to install the specified packages. In this particular case, the version of imblearn must be incompatible with the scikit-learn version you have selected.
imblearn
Technically, you should be using imbalanced-learn not imblearn, as stated in the package description. That also means you don't even need to install from PyPI, since imbalanced-learn is available through Conda Forge.
If you require having scikit-learn=0.23 then you must use imbalanced-learn=0.7. This should be under the regular dependencies, not in the pip: section.
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
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Install imbalanced-learn
You can use imbalanced-learn like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
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