kraken | Kraken taxonomic sequence classification system | Genomics library

 by   DerrickWood C++ Version: v1.1.1 License: GPL-3.0

kandi X-RAY | kraken Summary

kandi X-RAY | kraken Summary

kraken is a C++ library typically used in Artificial Intelligence, Genomics applications. kraken has no bugs, it has no vulnerabilities, it has a Strong Copyleft License and it has low support. You can download it from GitHub.

Please see the [Kraken webpage] or the [Kraken manual] for information on installing and operating Kraken. A local copy of the [Kraken manual] is also present here in the docs/ directory (MANUAL.html and MANUAL.markdown). [Kraken webpage]: [Kraken manual]:
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              kraken has a low active ecosystem.
              It has 188 star(s) with 105 fork(s). There are 27 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              There are 35 open issues and 88 have been closed. On average issues are closed in 153 days. There are 12 open pull requests and 0 closed requests.
              It has a neutral sentiment in the developer community.
              The latest version of kraken is v1.1.1

            kandi-Quality Quality

              kraken has no bugs reported.

            kandi-Security Security

              kraken has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              kraken is licensed under the GPL-3.0 License. This license is Strong Copyleft.
              Strong Copyleft licenses enforce sharing, and you can use them when creating open source projects.

            kandi-Reuse Reuse

              kraken releases are available to install and integrate.

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            kraken Key Features

            No Key Features are available at this moment for kraken.

            kraken Examples and Code Snippets

            No Code Snippets are available at this moment for kraken.

            Community Discussions

            QUESTION

            How to prevent bot from spamming embeds? Discord.py
            Asked 2021-May-22 at 14:13

            I have discord bot and it checks whether streamer is live or not. And I have a function that prevents it from spamming when someone is live:

            ...

            ANSWER

            Answered 2021-May-22 at 14:13

            To send the embed in the same message you can use content an example would be:

            Source https://stackoverflow.com/questions/67650286

            QUESTION

            Get recursive rootID of parent-child-table with ef-core
            Asked 2021-May-21 at 20:26

            I have an SQL-Table which is build like a tree list (parent child). Means you have rootId's and childId's. Each entity has a ParentId. If the ParentId is null then that element is a root item.

            Here an example of the hierarchical architecture

            ...

            ANSWER

            Answered 2021-May-21 at 20:26

            If you don't interest to load all records from database then process them, you have two choices :

            Solution 1 : Write a StoreProcedure and processing in database.

            Solution 2 : Write a recursive function that send multiple requests to database (In the amount of root depth)

            Here is a function for solution 2 :

            Source https://stackoverflow.com/questions/66242101

            QUESTION

            R for loop to extract info from a file and add it into tibble?
            Asked 2021-May-21 at 17:52

            I am not great with tidyverse so forgive me if this is a simple question. I have a bunch of files with data that I need to extract and add into distinct columns in a tibble I created.

            I want the the row names to start with the file IDs which I did manage to create:

            ...

            ANSWER

            Answered 2021-May-21 at 17:08

            QUESTION

            Pandas re-name dataframe headers
            Asked 2021-May-20 at 22:35

            I am having an issue with getting the correct headers in my pandas dataframes. Below is my full code. I would like to strip all the headers and then add my own at the very end.

            ...

            ANSWER

            Answered 2021-May-20 at 22:12

            Your column Index has become a MultiIndex because of concatenation, you should be able to reassign your columns with the first level from that MultiIndex

            Source https://stackoverflow.com/questions/67628538

            QUESTION

            getting 'SeriesGroupBy' object has no attribute 'high' in pandas resample of crypto data
            Asked 2021-May-17 at 18:15

            So when loading kraken.com historical datafeed into pandas to convert from tick data (time and sales) to OHLC (Open,High,Low,Close) data I run into an issue where I am not able to resample for 'high' & 'low' as they throw errors, but 'first', 'last', and 'sum' work just fine, I don't know why or what the available options are as it seems there is an enumerated list of options (total guess there).

            The code below takes heavy inspiration (out right copping blindly) from ryantjo's Resampling Market Tick Data.

            ...

            ANSWER

            Answered 2021-May-17 at 18:15

            If you want to extract the highest value from each group you need to use max

            Source https://stackoverflow.com/questions/67574952

            QUESTION

            How to colSum grouped by date
            Asked 2021-Apr-21 at 18:50

            I have a large table with a comments column (contains large strings of text) and a date column on which the comment was posted. I created a separate vector of keywords (we'll call this key) and I want to count how many matches there are for each day. This gets me close, however it counts matches across the entire dataset, where I need it broken down by each day. The code:

            ...

            ANSWER

            Answered 2021-Apr-21 at 18:50

            As pointed out in the comments, you can use group_by from dplyr to accomplish this.

            First, you can extract keywords for each comment/sentence. Then unnest so each keyword is in a separate row with a date.

            Then, use group_by with both date and comment included (to get frequency for combination of date and keyword together). The use of summarise with n() will give number of mentions.

            Here's a complete example:

            Source https://stackoverflow.com/questions/67197493

            QUESTION

            Firestore Security Rules Without User Authentication
            Asked 2021-Apr-09 at 18:44

            I have a simple cryptocurrency app that uses an API to fetch prices. I am using Firestore to store my API key and my app retrieves my API key from Firestore when launched. My API key is the only data I have in my Firestore. Since my app doesn't allow users to create profiles/accounts, I don't include user authentication in my rules. My security rules for Firestore are:

            ...

            ANSWER

            Answered 2021-Apr-09 at 17:22

            For best security, consider your security rules part of your application logic, on the same level as your application code is. This means that your rules should only allow the exact usage that your application code needs.

            Since you didn't share the relevant code, I'll make some assumptions and general recommendations below.

            If your code does get() call on all documents in the Data collection, then your current rules are a good proxy for that. But if for examples, your code accesses only a single document in that collection, this would be the closer equivalent:

            Source https://stackoverflow.com/questions/67025557

            QUESTION

            Join two tables bring mismatch values MYSQL
            Asked 2021-Mar-08 at 08:43

            I have two tables with >4million records i need to make a select query with where two columns match bring both tables value on this match and then i will insert that into a 3rth table:

            This is table A: (bitfinex)

            This is table B: (Kraken)

            I need to do a SELECT where timestamp and exchange_pair matches, as you can see in this image from table B the same timestamp can have multiple exchange_pair, what i need to do is match those with the other table columns and bring both table content

            this was the query i used at once but when analyzing the results i had some mismatch values on the joins ( i did not found the relation, it was not either timestamp or the exchange pair) i wonder if my query syntax is right for the result im looking for.

            ...

            ANSWER

            Answered 2021-Mar-08 at 08:43

            QUESTION

            Why am I getting an exception when filling the database with test data (EF Core - ASP-NET Core)
            Asked 2021-Feb-24 at 05:23

            I am getting an exception: "Object reference not set to an instance of an object". I can't understand, why. What's wrong with my connections between tables? I wanted to establish a relationship between the "Country" and "Company" tables in a one-to-many relationship, to avoid duplicating countries in the Company table ( This is what the table looked like before - Image3. I want to create 3 table.

            Information about exception: Image1

            Information2: Image2

            The table before: Image3

            An exception occurs in the tables: "Product" - "Company" - "Country". Seed Database:

            ...

            ANSWER

            Answered 2021-Feb-24 at 00:30

            QUESTION

            Data does not appear in linked tables (SubCategory and Products)
            Asked 2021-Feb-22 at 11:07

            In the table "Categories" the data is displayed normally. But I can't get data in tables: "SubCategories" and "Products". The values in the columns are == null. Foreign keys between tables appear when viewed by the designer. Previously, there were no such problems, but suddenly a problem appeared with using asynchrony.

            1. Image1 2) Image2 Logger1: Logger Logger2: Logger
            ...

            ANSWER

            Answered 2021-Feb-22 at 02:44

            I found that SubCategoryName is too short for "Video Game Consoles && Accessories". This gives an exception. Now it is varchar(30). Should be varchar(50) at least. All tables were seeded succesfully after I made some subcategory name and product name values shorter.

            I recommend you to fix the SubCategory and Product classes by replacing [StringLength(30)] by [StringLength(96)] or even larger.

            Source https://stackoverflow.com/questions/66307685

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install kraken

            You can download it from GitHub.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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