shasta | De novo assembly from Oxford Nanopore reads | Genomics library
kandi X-RAY | shasta Summary
kandi X-RAY | shasta Summary
See Shafin et al., Nature Biotechnology 2020 for error analysis of the Shasta assembler and more. Reads from this paper are available here. The assembly results are here. Here is a QUAST analysis of a Shasta assembly of CHM13 and a comparison with other assemblers. Requests for help: please file GitHub issues to report problems, request help, or ask questions. Please keep each issue on a single topic when possible. The goal of the Shasta long read assembler is to rapidly produce accurate assembled sequence using DNA reads generated by Oxford Nanopore flow cells as input.
Support
Quality
Security
License
Reuse
Top functions reviewed by kandi - BETA
Currently covering the most popular Java, JavaScript and Python libraries. See a Sample of shasta
shasta Key Features
shasta Examples and Code Snippets
Community Discussions
Trending Discussions on shasta
QUESTION
I have a data.frame with a column containing California counties in each cell separated by a space. I would like to add a comma and space after each one, however I can't just gsub every space into a comma and space, (i.e. gsub("\s",",\s",text)), as some counties in California have two names, (e.g. Los Angeles, San Francisco, etc.)
Fortunately, the two-word counties all have common first words so I'd like to write a gsub that preserves the space in those counties without adding a comma. I've attached example data as well as what I'd like the final form to look like. For instance, with this data, I'd like to add a comma and space except after "El", "San" and "Del".
Example data:
...ANSWER
Answered 2021-Jun-05 at 00:29Given that you know you are only looking for California counties, one "easy" way is just to replace only spaces that occur after a California county. To get that regex, I just concatenated the CA county names together with |
and added a space. The gsub
will replace any county name followed by a space with the same county name (\\1
), a comma, and a space.
QUESTION
I'm triyng build interfacing with simple tron smartcontract with front end but i cant! Here is problem:
...ANSWER
Answered 2021-Mar-25 at 20:49Try
instance = await tronWeb.contract().at(trc20ContractAddress)
QUESTION
I have a nested list that looks like this:
...ANSWER
Answered 2021-Jan-14 at 23:31Something like this:
QUESTION
I have a list such as this (this is pulled from some html texts using bs4):
...ANSWER
Answered 2021-Jan-14 at 21:28What about something like:
QUESTION
function deposit(address payable referrer) public payable whenNotPaused
{
}
...ANSWER
Answered 2020-Nov-17 at 11:57I'm trying to understand your question.
Are you want to use default parameters
?
Well, Solidity does not support default parameters, but it is on their roadmap (see https://github.com/ethereum/solidity/issues/232). To work around this, just use function overloading
:
QUESTION
I have a more or less specific question that probably pertains to loops in R. I have a dataframe:
...ANSWER
Answered 2020-Jul-20 at 08:48You can use str_extract_all
to extract all the states and unnest
to duplicate rows such that each state is in a separate row. There is an inbuilt constant state.name
which have the state names of US which can be used here to create pattern.
QUESTION
My question is very similar to this one, except that I want to exclude all columns that have a unique value in a column. If we assume that to be the input.
...ANSWER
Answered 2020-Jun-25 at 10:43Try this query:
QUESTION
I'm trying to get back all the struct
type records from my solidity contract
function please see the below solidity contract
code snippet
ANSWER
Answered 2020-Apr-12 at 03:24In ABI, any return value of a struct type will be interpreted as tuple
. In your case, its type is tuple[]
.
The library has no clue what's your tuple
is, how long it is, what's the type.
You should parse the return data by hand.
QUESTION
- I've installed the latest tronbox (2.7.5) using npm
- Created a new project using command
tronbox init
- In file tronbox.js i've update the compiler version to 0.4.25 (see the file below).
- When compiling using command
tronbox compile --compile-all --reset
I'm getting:
Windows error:
And then the following message in my terminal:
...ANSWER
Answered 2019-Dec-11 at 09:05This seems like a regression bug in tronbox 2.7.4 and 2.7.5 since when I use tronbox 2.5.2 everything works smoothly.
QUESTION
I am supposed to obtain the following result: Demographics: Ratio of Men and Women Write a query that shows the ratio of men and women (pop_male divided by pop_female) over the age of 18 by county in 2018. Order the results from the most female to the most male counties.
...ANSWER
Answered 2019-Mar-26 at 23:35Don't want to override the SQLRaptor's helpful response in comments, but for the sake of completeness :)
SQL treats integer division as integer, therefore truncating it. To avoid that -- cast at least one of the values to a floating point data type (e.g. REAL or FLOAT for SQLite -- check the manual on data types here: https://www.sqlite.org/datatype3.html)
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install shasta
Support
Reuse Trending Solutions
Find, review, and download reusable Libraries, Code Snippets, Cloud APIs from over 650 million Knowledge Items
Find more librariesStay Updated
Subscribe to our newsletter for trending solutions and developer bootcamps
Share this Page