SURVIVOR | Toolset for SV simulation , comparison and filtering | Genomics library

 by   fritzsedlazeck C++ Version: 1.0.7 License: MIT

kandi X-RAY | SURVIVOR Summary

kandi X-RAY | SURVIVOR Summary

SURVIVOR is a C++ library typically used in Artificial Intelligence, Genomics applications. SURVIVOR has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. You can download it from GitHub.

SURVIVOR is a tool set for simulating/evaluating SVs, merging and comparing SVs within and among samples, and includes various methods to reformat or summarize SVs. Please see our github wiki for more information ().
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            kandi-support Support

              SURVIVOR has a low active ecosystem.
              It has 276 star(s) with 41 fork(s). There are 12 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              There are 57 open issues and 121 have been closed. On average issues are closed in 44 days. There are 1 open pull requests and 0 closed requests.
              It has a neutral sentiment in the developer community.
              The latest version of SURVIVOR is 1.0.7

            kandi-Quality Quality

              SURVIVOR has no bugs reported.

            kandi-Security Security

              SURVIVOR has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              SURVIVOR is licensed under the MIT License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              SURVIVOR releases are available to install and integrate.
              Installation instructions are not available. Examples and code snippets are available.

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            Currently covering the most popular Java, JavaScript and Python libraries. See a Sample of SURVIVOR
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            SURVIVOR Key Features

            No Key Features are available at this moment for SURVIVOR.

            SURVIVOR Examples and Code Snippets

            Parses a surrogate survivor .
            javadot img1Lines of Code : 38dot img1License : Permissive (MIT License)
            copy iconCopy
            public String predictPartyVictory(String senate) {
                    int[] blocks = new int[2];
                    boolean[] status = new boolean[senate.length()];
                    boolean changes = true;
                    while (changes) {
                        changes = false;
                        for (int  
            Visit a single survivor .
            javadot img2Lines of Code : 4dot img2License : Non-SPDX
            copy iconCopy
            @Override
              public void visitSoldier(Soldier soldier) {
                LOGGER.info("Greetings {}", soldier);
              }  
            Checks if we have a survivor of the manager
            javadot img3Lines of Code : 3dot img3License : Permissive (MIT License)
            copy iconCopy
            private static void howIsGirlFriendOfManager() throws GirlFriendOfManagerUpsetException {
                    throw new GirlFriendOfManagerUpsetException("Girl friend of manager is in bad mood");
                }  

            Community Discussions

            QUESTION

            function write in python for a json file
            Asked 2021-Jun-06 at 22:56

            I'm a beginner in python so I have this program where it classifies tweets into different categories (sport,sante, culture...) using keywords and I would like to copy-paste every line of the JSON file that belongs to a certain category into a file named text1 and I did the following : but I guess I did it the wrong way since I keep receiving the same error please any suggestion on how to solve this problem!

            ...

            ANSWER

            Answered 2021-Jun-06 at 22:54

            This might be a very simple case of fixing the encoding.

            Your error says:

            Source https://stackoverflow.com/questions/67864202

            QUESTION

            GCP Workflows - Set destination table?
            Asked 2021-Jun-06 at 18:54

            I am using Google Cloud Workflows using the googleapis.bigquery.v2. jobs.query to transform data on BigQuery. I am able to run my Workflows correctly and perform queries on a given tables but what I am trying to do now is to store the result of of query on a different dataset and table. There is nothing about destination table on the googleapis.bigquery.v2.jobs.query documentation. Based on this SO question, I found that it is possible to set destination dataset and table but confused if I can do something similar on my .yaml

            example I found on SO

            ...

            ANSWER

            Answered 2021-Jun-06 at 18:54
            1. The googleapis.bigquery.v2.jobs.query endpoint doesn't offer creating a destination table via API/YAML syntax, but you can write your query to create the table

              create table mytable as (select ........)

            2. To use the destinationTable API setup you need to use a different endpoint: googleapis.bigquery.v2.jobs.insert which has a lot more to configure, there is a full example on this linked article.

            Essentally you need the query section from it.

            Source https://stackoverflow.com/questions/67861364

            QUESTION

            Having trouble getting my tests to pass on my freeCodeCamp course for a Product Landing Page... please help :)
            Asked 2021-May-28 at 01:41

            I cannot pass Story #5: "When I click a .nav-link button in the nav element, I am taken to the corresponding section of the landing page." I have all of my href attributes set to the corresponding id attributes and when i click on them they take me to the correct section of the page, but I am still failing this test... What am I Doing Wrong???

            The code I wrote is below:

            ...

            ANSWER

            Answered 2021-May-28 at 01:41

            QUESTION

            Ggplot Bar chart not fully ordered and wrong count axis scale
            Asked 2021-May-20 at 09:57

            I am running into a small glitch with my plot.

            I have the following tibble

            ...

            ANSWER

            Answered 2021-May-20 at 09:57
            1. By default reorder reorders by the mean in case of multiple values. To get the order right, reorder by the sum.

            2. Map n on x instead of total. Otherwise you get two times total for each group.

            Source https://stackoverflow.com/questions/67617896

            QUESTION

            How to create stacked bar chart in python, color coded by category
            Asked 2021-May-16 at 19:23

            I'm working on a popular Titanic dataset on Kaggle, and I would like to create a bar chart showing the numbers of survivors vs. deceased by gender. On the x-axis, I want gender (male/female). I want to have the survivors and deceased stacked and color coded.

            Here is my current code, which produces four bars for each combination of male/survived, male/deceased, female/survived, female/deceased:

            ...

            ANSWER

            Answered 2021-May-16 at 16:29

            With some example data I believe this is what you are looking for, using matplotlib:

            Source https://stackoverflow.com/questions/67558783

            QUESTION

            How to extract keywords below and above a text from an article
            Asked 2021-May-03 at 13:30

            I have this character vector of lines from a journal:

            ...

            ANSWER

            Answered 2021-May-03 at 12:50

            If I understood correctly, you are sort of scanning the pdf downloaded from here. I think you should find a better way to scan your PDFs.

            Till then, the best option could be this:

            Source https://stackoverflow.com/questions/67368471

            QUESTION

            Python find the main element in the xml
            Asked 2021-Apr-24 at 09:21

            Question is simple. I need to find the tag of the main element in a xml using python.

            ...

            ANSWER

            Answered 2021-Apr-24 at 09:21

            Finally found a solution. I recursively iterate every element and count children of each element. At the end of the loop, the element with the most children becomes the main element. Here's the code:

            Source https://stackoverflow.com/questions/67201660

            QUESTION

            Elasticsearch parent child has_child returns no results
            Asked 2021-Apr-23 at 18:04

            I'm trying to test out the parent/child relationship but havent throuble getting any results back for has_child queries. I have this mapping

            ...

            ANSWER

            Answered 2021-Apr-23 at 18:04

            When you are indexing the child document, the name for the field for the join data type is written wrong. It should be "join_field" and not "join_filed"

            Update your child document as shown below

            Source https://stackoverflow.com/questions/67234216

            QUESTION

            How do I perform a join between two other joins
            Asked 2021-Apr-19 at 09:53

            I'd like to know how to do 2 execution plans: "traditional" execution plan joins (A with B) and then C. The "new" plan joins (A with B) then (A with C) and then joins the result of those joins so there would be 3 joins. How would I code the traditional and new plan in Oracle SQLPlus given the code below? I also need to measure the time complexity of both methods to show that the new plan takes less time, which I believe I just do with set timer on; The joins can be on whatever attributes work. Same with select statements. I made a artist, b album, c track, and d played.

            Here's the database:

            ...

            ANSWER

            Answered 2021-Apr-18 at 06:13

            Your question doesn't make a lot of sense, because it's imposing bizarre restrictions that we can't really assess, but I don't mind telling you how to join two joins

            You already know how to join three tables in the normal/traditional/sensible sense. Here's how to join them as you ask:

            Source https://stackoverflow.com/questions/67143352

            QUESTION

            tab css click to open and to close with just css
            Asked 2021-Apr-10 at 08:05

            I don't want javascript.

            I need when i click on the tab to open and when i click again it will close without javascript just with css please

            ...

            ANSWER

            Answered 2021-Apr-10 at 08:03

            You will surely need Javascript to do this. Or you can use Bootstrap if you want to get rid of Javascript or not to involve in JS.

            In simple: You can also use Checkboxes instead of a radio button.

            In your case, When you click on another tab, the previously opened tab becomes closed.

            But in this case, Your previous tab will keep open until you again click on particular tab

            Source https://stackoverflow.com/questions/67029969

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install SURVIVOR

            You can download it from GitHub.

            Support

            If you have questions or encounter a problem please contact: fritz.sedlazeck@gmail.com.
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