devector | Resizable contiguous sequence container with fast appends | Genomics library

 by   orlp C++ Version: Current License: Zlib

kandi X-RAY | devector Summary

kandi X-RAY | devector Summary

devector is a C++ library typically used in Artificial Intelligence, Genomics applications. devector has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. You can download it from GitHub.

Resizable contiguous sequence container with fast appends on either end.
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              devector has a low active ecosystem.
              It has 31 star(s) with 1 fork(s). There are 4 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 0 open issues and 1 have been closed. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of devector is current.

            kandi-Quality Quality

              devector has no bugs reported.

            kandi-Security Security

              devector has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              devector is licensed under the Zlib License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              devector releases are not available. You will need to build from source code and install.
              Installation instructions are not available. Examples and code snippets are available.

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            devector Key Features

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            devector Examples and Code Snippets

            No Code Snippets are available at this moment for devector.

            Community Discussions

            QUESTION

            Issues with installing Devectorize package in Julia
            Asked 2020-Nov-24 at 03:56

            I wanted to install the devectorize package in Julia, but I'm having an issue. I run

            ...

            ANSWER

            Answered 2020-Nov-24 at 03:56

            Devectorize was only beneficial to Julia before version 0.6. Since then, vectorized expressions are automatically fused. For more info, you should check out this blog post from when the feature was added. https://julialang.org/blog/2017/01/moredots/

            Source https://stackoverflow.com/questions/64979820

            QUESTION

            What went wrong with my Julia loops/devectorized code
            Asked 2020-Aug-21 at 23:33

            I'm using Julia 1.0. Please consider the following code:

            ...

            ANSWER

            Answered 2020-Aug-21 at 23:33

            So first let me comment how I would write your function if I wanted to use a loop:

            Source https://stackoverflow.com/questions/63530966

            QUESTION

            Android - Gridlayout android.support.v7.widget.GridLayout cannot be cast to android.widget.GridLayout
            Asked 2020-Apr-19 at 00:09

            I want to create a GridLayout able to run in all the APIs.

            The thing is, when i use GridLayout instead of android.support.v7.widget.GridLayout the app runs fine in Android 7.1.1 but in older versions it crashes.

            But if i use android.support.v7.widget.GridLayout instead of GridLayout (like the code below) it always crashes.

            activity_main

            ...

            ANSWER

            Answered 2018-Feb-13 at 06:43

            Caused by: java.lang.ClassCastException: android.support.v7.widget.GridLayout cannot be cast to android.widget.GridLayout at devector.dom.gridtest.MainActivity.onCreate(MainActivity.java:21)

            => From this line, it's clear that you must be importing and referring to android.widget.GridLayout where as you have taken android.support.v7.widget.GridLayout in XML layout. Use and refer either of any in both layout and class file.

            Source https://stackoverflow.com/questions/48760862

            QUESTION

            Julia: how to see devectorized code?
            Asked 2018-Aug-15 at 07:20

            I would like to see devectorized code of some expression say here

            ...

            ANSWER

            Answered 2018-Aug-15 at 07:20

            I don't think that what you ask for exists (please proof me wrong if I'm mistaken!).

            The best you can do is use @code_lowered, @code_typed, @code_llvm, @code_native macros (in particular @code_lowered) to see what happens to your Julia code snippet. However, as Julia isn't translating all dots to explicit for loops internally, non of these snippets will show you a for-loop version of your code.

            Example:

            Source https://stackoverflow.com/questions/51849951

            QUESTION

            Does the term "vectorization" mean different things in different contexts?
            Asked 2018-Aug-04 at 15:41

            Based on what I've read before, vectorization is a form of parallelization known as SIMD. It allows processors to execute the same instruction (such as addition) on an array simultaneously.

            However, I got confused when reading The Relationship between Vectorized and Devectorized Code regarding Julia's and R's vectorization performance. The post claims that devectorized Julia code (via loops) is faster than the vectorized code in both Julia and R, because:

            This confuses some people who are not familiar with the internals of R. It is therefore worth noting how one improves the speed of R code. The process of performance improvement is quite simple: one starts with devectorized R code, then replaces it with vectorized R code and then finally implements this vectorized R code in devectorized C code. This last step is unfortunately invisible to many R users, who therefore think of vectorization per se as a mechanism for increasing performance. Vectorization per se does not help make code faster. What makes vectorization in R effective is that it provides a mechanism for moving computations into C, where a hidden layer of devectorization can do its magic.

            It claims that R turns vectorized code, written in R, into devectorized code in C. If vectorization is faster (as a form of parallelization), why would R devectorize the code and why is that a plus?

            ...

            ANSWER

            Answered 2018-Aug-04 at 10:41

            "Vectorization" in R, is a vector processing in R's interpreter's view. Take the function cumsum as an example. On entry, R interpreter sees that a vector x is passed into this function. However, the work is then passed to C language that R interpreter can not analyze / track. While C is doing work, R is just waiting. By the time that R's interpreter comes back to work, a vector has been processed. So in R's view, it has issued a single instruction but processed a vector. This is an analogy to the concept of SIMD - "single instruction, multiple data".

            Not just the cumsum function that takes a vector and returns a vector is seen as "vectorization" in R, functions like sum that takes a vector and returns a scalar is also a "vectorization".

            Simply put: whenever R calls some compiled code for a loop, it is a "vectorization". If you wonder why this kind of "vectorization" is useful, it is because a loop written by a compiled language is faster than a loop written in an interpreted language. The C loop is translated to machine language that a CPU can understand. However, if a CPU wants to execute an R loop, it needs R's interpreter's help to read it, iteration by iteration. This is like, if you know Chinese (the hardest human language), you can respond to someone speaking Chinese to you faster; otherwise, you need a translator to first translator Chinese to you sentence after sentence in English, then you respond in English, and the translator make it back to Chinese sentence by sentence. The effectiveness of communication is largely reduced.

            Source https://stackoverflow.com/questions/51681978

            QUESTION

            My loops are slow. Is that because of if statements?
            Asked 2017-Oct-05 at 09:26

            I read this post and realized that loops are faster in Julia. Thus, I decided to change my vectorized code into loops. However, I had to use a few if statements in my loop but my loops slowed down after I added more such if statements.

            Consider this excerpt, which I directly copied from the post:

            ...

            ANSWER

            Answered 2017-Oct-05 at 09:26

            Firstly, I don't think the performance here is very odd, since you're adding a lot of work to your function.

            Secondly, you should actually return x here, otherwise the compiler might decide that you're not using x, and just skip the whole computation, which would thoroughly confuse the timings.

            Thirdly, to answer your question 1: You can implement it like this:

            Source https://stackoverflow.com/questions/46576037

            QUESTION

            Filling a matrix using parallel processing in Julia
            Asked 2017-Jul-22 at 08:25

            I'm trying to speed up the solution time for a dynamic programming problem in Julia (v. 0.5.0), via parallel processing. The problem involves choosing the optimal values for every element of a 1073 x 19 matrix at every iteration, until successive matrix differences fall within a tolerance. I thought that, within each iteration, filling in the values for each element of the matrix could be parallelized. However, I'm seeing a huge performance degradation using SharedArray, and I'm wondering if there's a better way to approach parallel processing for this problem.

            I construct the arguments for the function below:

            ...

            ANSWER

            Answered 2017-Jul-22 at 08:25

            If add_vecs seems to be the critical function, writing an explicit for loop could offer more optimization. How does the following benchmark:

            Source https://stackoverflow.com/questions/45178227

            QUESTION

            Julia language. How to beat vectorized operations?
            Asked 2017-Jul-02 at 12:55

            It is said that Julia for-loops are as fast as vectorized operations and even faster (if they are used properly). I have two pieces of code. The idea is to find a sample statistic for a given 0-1 sequence, which is x (in these two examples i'm trying to find a sum, but there are more complicated examples, i'm just trying to understand a general meaning of performance pitfalls in my code). The first looks like:

            ...

            ANSWER

            Answered 2017-Jul-02 at 12:55

            This is a curious case. There seems to be a performance problem when accumulating Int8s in an Int64 variable.

            Let's try these functions:

            Source https://stackoverflow.com/questions/44813716

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

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            Install devector

            You can download it from GitHub.

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            gh repo clone orlp/devector

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