vt | tool set for short variant discovery | Genomics library

I want to create a new type of variable which has his own constant values. So I want to do something likes this: (This is a not working example to explain the idea)

I am running a function from an external library here: https://github.com/baggepinnen/SingularSpectrumAnalysis.jl

When running, I get this output printed in the console:

This is my first post here and I am not that experienced, so please excuse my ignorance.

I am building a Monte Carlo simulation in C++ for my PhD and I need help in optimizing its computational time and performance. I have a 3d cube repeated in each coordinate as a simulation volume and inside every cube magnetic particles are generated in clusters. Then, in the central cube a loop of protons are created and move and at each step calculate the total magnetic field from all the particles (among other things) that they feel.

At this moment I define everything inside the main function and because I need the position of the particles for my calculations (I calculate the distance between the particles during their placement and also during the proton movement), I store them in dynamic arrays. I haven't used any class or function,yet. This makes my simulations really slow because I have to use eventually millions of particles and thousands of protons. Even with hundreds it needs days. Also I use a lot of for and while loops and reading/writing to .dat files.

I really need your help. I have spent weeks trying to optimize my code and my project is behind schedule. Do you have any suggestion? I need the arrays to store the position of the particles .Do you think classes or functions would be more efficient? Any advice in general is helpful. Sorry if that was too long but I am desperate...

Ok, I edited my original post and I share my full script. I hope this will give you some insight regarding my simulation. Thank you.

Additionally I add the two input files

parametersDiffusion_spher_shel.txt

parametersIONP_spher_shel.txt

I am trying to compile a tool for my project. I have solved all the problems so far, but i can't find the solution for this problem.

If anyone could give me help, i would appreciate it, Thank you.

NtlScriptEncrypter.cpp

Overall, I am trying to render images using Unity on a remote cluster.

The cluster does not have an X server; I don't have sudo permissions, or can start a Docker container, but I can start a Singularity container.

My plan is to create a container that would simulate the X Server. I created the following Singularity definition file:

Lately I have started implementing TLS for the sport as a fun project and I'm currently trying to self make and send locally a client hello TLS packet (a minimal one).

When observed via the loopback interface in Wireshark it appears as pure data instead of a tls layer with all of the various fields and after lots of trying I decided to ask here the following questions:

1. What's the difference between my self made packet and a real TLS client hello one?
2. How does Wireshark selectively makes one appear as a TLS layered instead of pure data, is there an identifier field in the packet that declares it as pure data or a TLS layered one?
3. How can I make my packet to appear as a client hello TLS packet instead of pure data?

Here is my server and client that send basically my c code output (remember that they are not made for real TLS handling but just to show the packet in Wireshark):

server.py

I have a JSON file that contains several images and annotations. Each image has an id, and each annotation references a caption and the image_id of the image. There are thousands of images and multiple annotations refer to the same image. Here's a sample for only one image and its annotations (link to full data):

I know this question asked before but I couldn't understand and integrate this into my code. I have 2 arraylist.One for api data and the other for database data.Database's arraylist working successful when it's alone. But when I add the API's arraylist, i get this exception java.lang.IndexOutOfBoundsException: Index: 0, Size: 0

This is Fragment file;

I have a class with member variables self._duration that I am updating periodically by calling one of its method in a process. The class definition is as below :