c-algorithms | experimental C library of common data structures | Learning library
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An experimental C library of common data structures and algorithms
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QUESTION
I'm experimenting with a genetic search algorithm and after building the initial population at random, and then selecting the top two fittest entries, I need to 'mate' them (with some random mutation) to create 64 'children'. The crossover part, explained here:
seems easy to follow, but I can't seem to figure out how to implement it in Python. How can I implement this crossover of two integers?
...ANSWER
Answered 2020-Mar-14 at 22:53Here is a function called crossover that takes two parents and a crossover point. The parents should be lists of integers of the same length. The crossover point is the point before which genes get exchanged, as defined in the article that you linked to. It returns the two offspring of the parents.
QUESTION
I'm writing an genetic algorithm for finding coefficients having given X, Y points. The principle of operation is described on this page - https://towardsdatascience.com/introduction-to-genetic-algorithms-including-example-code-e396e98d8bf3
I have problem, because sometimes after mutation or crossover my double value is NaN.
I've tried do this using byte[] and BitArray, but in both approaches I have the same result.
Converting double <-> BitArray:
...ANSWER
Answered 2019-Jun-16 at 18:15It's because you're using random bytes to generate IEEE-754 numbers. You should not do that because IEEE-754 defines the structure for these numbers and using random byte input won't give you random numbers because some bits represent things like the is Not-a-Number
field, and NaN values are "viral" and invalidate other calculations.
To generate random Double
numbers you should use System.Random.NextDouble()
.
QUESTION
I'm using a custom C implementation of data structures from github. Documentation here: http://fragglet.github.io/c-algorithms/doc/
It's my first time with this low level HashTable usage and I'm getting some pointer problems when I recover the values that I previously inserted.
My code is just a simple test with just the necessary to insert and recover data.
...ANSWER
Answered 2019-Apr-26 at 15:58You have some pointer confusion going on. If you replace:
QUESTION
I am trying to make work a piece of code in Python, composed of four modules.
When running I get the following error in the module optimizer_Neuroevolution: "line 149, in evolve retain_length = int(len(graded)*self.retain) TypeError: unsupported operand type(s) for *: 'int' and 'type'
The modules are as follow:
First module main_Neuroevolution:
...ANSWER
Answered 2018-Oct-19 at 17:11In this function,
QUESTION
I couldn't figure out the following problem: if I may, I'd like to give you right away an example
Imagine, you work with marketing data and you came up with a good regression model, predicting the "reach" of a certain campaign. All fine and dandy. Data Scientist Job done.
But wait. We can do more.
My question to you is:
Assuming that we have a good model, how can we optimize the input vector ( = marketing campaign) to get the best possible "reach" ( = predictor / goal to optimize)?
I was googling like crazy, but couldn't find any good approach (I am not talking about any hypterparameter optimization). The best approach I found so far is a genetic algorithm... example here and here
Or - a brute force approach - calculate an enormous grid with tons of possible input vectors and then check, which one is the best (straight forward) - but that would be computational expensive.
I would love to hear your opinion on this. Any advice on which topics I should check out?
...ANSWER
Answered 2018-Sep-27 at 22:35A very long comment:
Genetic algorithms can be nested. Put your genetic solution finder into a fitness function. Give it to a parent genetic algorithm. Have them search results by "optimizing input vector" from outer GA and "optimizing goal" from inner GA.
You can even add a third layer of GA, to test the construction parameters of middle layer GA because we may not know what kind of search space we need. If we knew it, then we wouldn't need to optimize that vector.
You can even decrease dimensions of problem per GA this way.
QUESTION
I am using python-3.x, and I am trying to generate an initial population that contains random real numbers between 0 and 1 where these numbers should be one of the following: 0, 0.33333, 0.666667 or 1
That means the difference between these numbers is 0.33333 (1/3). I tried to modify this code in many ways but their no luck
...ANSWER
Answered 2018-May-10 at 14:57>>> np.random.choice([0, 1/3., 2/3., 1], size=(7,2), replace=True)
array([[0. , 0.33333333],
[0.33333333, 0.66666667],
[0. , 0. ],
[0.66666667, 0. ],
[0.33333333, 0.33333333],
[1. , 1. ],
[0.33333333, 0.33333333]])
>>> i_min = 0
>>> i_max = 1
>>> level = 3
>>> np.random.choice(np.linspace(i_min, i_max, 2**level), size=(7,2), replace=True)
array([[0.28571429, 0.14285714],
[0.85714286, 0.57142857],
[0.71428571, 0.42857143],
[0.71428571, 1. ],
[0.14285714, 0.85714286],
[0. , 0. ],
[1. , 0. ]])
QUESTION
I'm writing a genetic algorithm to minimize a function. I have two questions, one in regards to selection and the other with regards to crossover and what to do when it doesn't happen.
Here's an outline of what I'm doing:
...ANSWER
Answered 2018-Mar-19 at 11:30- I don't see anything wrong with the same individual being the parent of more than one child per generation. It can only affect your diversity a little bit. If you don't like this, or find a real lack of diversity at the final generations, you can actually flag the individual so it cannot be parent more than once per generation.
- I actually don't fully agree with the tutorial, I think after you have selected the individuals that will become parents (based on their fitness, of course) you should actually perform the crossover. Otherwise you will be cloning a lot of individuals to the next generation.
QUESTION
I'm trying to install and test c library c-algorithms from Github.
https://github.com/fragglet/c-algorithms/blob/master/test/test-queue.c
When I try to test the installation from the generated test folder with:
gcc -o test-arraylist `pkg-config --cflags --libs libcalg-1.0` test-arraylist.c
I get the following error massage:
test-arraylist.c:30:23: fatal error: arraylist.h: No such file or directory
compilation terminated.
I use a Vagrant box: ubuntu/xenial32 with Ubuntu 14.04.5 LTS
Prior to installation of c-algorithms:
sudo apt-get install autoconf
sudo apt-get install libtool
sudo apt-get install pkg-config
To install the library I have done following:
sudo ./autogen.sh
sudo ./configure
sudo make
sudo make install
Any help would be highly apriciated
...ANSWER
Answered 2017-Oct-19 at 12:08This is probably going to be stomped on by process-fetishizers.
But.
When you build in a Unix/Linux operating system (and derivatives like RTEMS), you are building off other people's libraries - so you need those libraries and their header files ( just like c-alg... ) installed in locations that your compiler can find.
To find a file that is associated with a package, use dpkg as explained here: https://askubuntu.com/questions/481/how-do-i-find-the-package-that-provides-a-file
But you have another problem you might not be aware of. You are trying to compile a test program using a gcc command when the software uses GNU autoconf automake and probably libtool to function PROPERLY.
Perhaps you don't understand you need to make sure autoconf, automake, and then libtool find the right configuration from one directory system to another. Fedora puts files in differing spots from Ubuntu distros.
Instead run:
QUESTION
I am attempting to run the code from this excellent article: Finding solutions using genetic algorithms in F#
Frustratingly, it reports an FS0001 error, as follows:
This expression was expected to have type 'int' but here has type 'unit'
It omplains that the very last line of the code is incorrect:
...ANSWER
Answered 2017-Sep-21 at 02:05From my comment: "main" must return int. Add a line with just "0" at the end of it.
QUESTION
I need to sign (and verify eventually) one of the nodes of an XML document using RSA-SHA1 algorithm. w3.org link
RSA-SHA1 URI:
http://www.w3.org/2000/09/xmldsig#rsa-sha1
Specified in:
section 6.4.2 of [XMLDSIG-CORE2002]
I am following this example, however cannot figure how to change the algorithm to required.
The signature generation happens here:
...ANSWER
Answered 2017-Sep-07 at 13:28In .NET Framework 1.1 through .NET Framework 4.7 you get RSA-SHA-1 by simply setting signedXml.SigningKey
to an RSA key object.
If .NET 4.7.1 (currently in preview) is installed the default for RSA will change to RSA-SHA-2-256, per https://github.com/Microsoft/dotnet/blob/master/releases/net471/dotnet471-changes.md.
So, if you really want a RSA-SHA-1 signature you need to
a) set signedXml.SigningKey
to an RSA key
b) set signedXml.SignedInfo.SignatureMethod = SignedXml.XmlDsigRSASHA1Url
(both before calling signedXml.ComputeSignature()
)
Conversely, if you want to do something better than RSA-SHA-1 on current versions, set signedXml.SignedInfo.SignatureMethod to SignedXml.XmlDsigSHA256Url
or better.
Word of warning: SHA-1 is considered broken for cryptographic purposes now that a collision has been found. While it's not generalized enough (at this point) to attack arbitrary XML, it may well grow up to that point. You really shouldn't be using SHA-1 in anything new, and should consider validating that your signature method is something better than SHA-1 based when deciding whether to accept a signed document.
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