reCOGnizer | domain based annotation with databases from the Conserved | Genomics library

by iquasere HTML Version: 1.9.1 License: BSD-3-Clause

X-Ray Key Features Code Snippets Community Discussions(10)Vulnerabilities Install Support

kandi X-RAY | reCOGnizer Summary

reCOGnizer is a HTML library typically used in Artificial Intelligence, Genomics, Symfony applications. reCOGnizer has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. You can download it from GitHub.

A tool for domain based annotation with databases from the Conserved Domains Database.

Support

Quality

Security

License

Reuse

Support

reCOGnizer has a low active ecosystem.

It has 19 star(s) with 2 fork(s). There are 2 watchers for this library.

It had no major release in the last 12 months.

There are 1 open issues and 12 have been closed. On average issues are closed in 56 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of reCOGnizer is 1.9.1

Quality

reCOGnizer has no bugs reported.

Security

reCOGnizer has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

reCOGnizer is licensed under the BSD-3-Clause License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

reCOGnizer releases are available to install and integrate.

Installation instructions are not available. Examples and code snippets are available.

Top functions reviewed by kandi - BETA

kandi has reviewed reCOGnizer and discovered the below as its top functions. This is intended to give you an instant insight into reCOGnizer implemented functionality, and help decide if they suit your requirements.

Download CDD resources
Reads a cog map from a cog map
Convert a boolean value to a boolean
Generate the cog map for the given conversion
Read a cog map from a file
Perform taxonomic workflow
Check tax databases and create tax databases
Check if a database is good
Check if a regular database exists
Organize annotation results
Autocomplete report
Parse a FASTA file
Perform cog taxonomic analysis
Checks for COG tax databases for COG
Run rpsbproc
Retrieve lineages of taxages of interest in taxonomy
Return human - readable time
Splits a FASTA file into a single FASTA file
Get lineage for taxids
Argument parser
Performs an annotation with rps - blast
Convert a string to a boolean
Split fasta file by taxon
Load relational tables
Download cog2ko files
Perform multiprocessing workflow
Replace spaces with underscores

Get all kandi verified functions for this library.

reCOGnizer Key Features

No Key Features are available at this moment for reCOGnizer.

reCOGnizer Examples and Code Snippets

No Code Snippets are available at this moment for reCOGnizer.

Community Discussions

Trending Discussions on reCOGnizer

I'm getting module 'cv2.cv2' has no attribute 'legacy' ERROR. How can I fix it?

"Unable to Load Asset" for PDF's in Form Recognizer Labeling Tool

Flutter Firebase: data updating in Firebase, but not showing the counter update on the screen automatically

pyinstaller output file running but not working correctly as expected

Error in "from keras.utils import to_categorical"

How to log out user and How to check user verify mail

Problem reading pdf file for azure form recognizer

Why does my UITapGestureRecognizer does not get called when animating the UIView?

Unhandled Exception when using url launcher in flutter

I am getting lookup error in google recognition

QUESTION

I'm getting module 'cv2.cv2' has no attribute 'legacy' ERROR. How can I fix it?

Asked 2021-Jun-12 at 19:35

This is my code: import numpy as np import cv2 import pickle

...

ANSWER

Answered 2021-Jun-12 at 19:32

I remember getting this error a while back.

In your CMD prompt run these three commands and then try to run your program again.

pip3 install opencv-python==4.4.0.46
pip3 install opencv-contrib-python==4.4.0.46
pip3 install opencv-contrib-python-headless==4.4.0.46

The version specifics may not be necessary but it's what worked last for me.

Source https://stackoverflow.com/questions/67942853

QUESTION

"Unable to Load Asset" for PDF's in Form Recognizer Labeling Tool

Asked 2021-Jun-09 at 17:04

Form Recognizer shows 'unable to load asset' on PDFs. I have tried multiple PDF's from various sources and they all return this error. JPGs work as expected.

An additional error popped up

Uncaught NetworkError: Failed to execute 'importScripts' on 'WorkerGlobalScope': The script at 'http://fotts.azureedge.net/npm/pdfjs-dist/2.3.200/pdf.worker.js' failed to load

...

ANSWER

Answered 2021-Jun-09 at 17:04

What Form Recognizer sample tool version are you using ? Do you get this error also on the latest release - http://fott-2-1.azurewebsites.net/

Source https://stackoverflow.com/questions/67905749

QUESTION

Flutter Firebase: data updating in Firebase, but not showing the counter update on the screen automatically

Asked 2021-Jun-06 at 12:41

I am holding a counter in my Firebase which holds the total upvotes for a picture. When the upvote button is pressed, the database should update the counter of that specified counter by 1, which it does. However, it doesn't show the update on the app screen. For example if an image has 8 upvotes, and the button is pressed to upvote, it will still show 8 upvotes on the screen but in the database it will now be 9 upvotes. When I hot refresh the value changes. How can I make both things happen asynchronously? I tried playing around with it and it's always that either it updates the database and the screen stays unchanged, or the screen changes and the database doesn't.

For the functions below, they behave as expected but just not asynchronously on the screen.

The relevant function that increments the followers in the database:

...

ANSWER

Answered 2021-Mar-23 at 00:11

Currently you have nothing triggering a rebuild from Firebase. You need to return a FutureBuilder or StreamBuilder in your getUpvotes function. That will get notified of changes in the cloud and trigger a re-build.

Here's something to get you started. Return this instead in your getUpvotes method and complete the stream portion of the StreamBuilder

Source https://stackoverflow.com/questions/66755010

QUESTION

pyinstaller output file running but not working correctly as expected

Asked 2021-Jun-04 at 10:34

I made a very simple arabic speech recognition program and attempted to make an exe of it using Pyinstaller. The exe file is succcesfully generated, but when I run it It does not recognize the speech, while, when I run the program from the IDE (Pycharm) It works fin an recognize the speech as expected. Here is my code:

...

ANSWER

Answered 2021-May-24 at 19:48

I just figured out that the problem occurred when I convert using -w flag. Hence, to solve that I converted my .py script to .exe with the console (which means with out -w flag) so the command was : pyinstaller -F main.py

And in order to hide the console I added the following code to my main.py:

Source https://stackoverflow.com/questions/67623528

QUESTION

Error in "from keras.utils import to_categorical"

Asked 2021-Jun-04 at 00:33

I have probem with this code , why ?

the code :

...

ANSWER

Answered 2021-Apr-09 at 09:33

Use from tensorflow.keras. instead of from keras.

Source https://stackoverflow.com/questions/67018079

QUESTION

How to log out user and How to check user verify mail

Asked 2021-Jun-03 at 10:56

I got the following problem. When user register he will be on a page, where I show a message like check your Email account. And when user check his account and confirm his mail he automatically get to homepage. So far so good. But when user press register button an get mail and reload the page he get also inside homepage without confirm his mail. I trie this

...

ANSWER

Answered 2021-Jun-03 at 10:56

You should check email verification within you're sign-in method, and if the email was verified then return instance.signInWithEmailAndPassword.

full code:

Source https://stackoverflow.com/questions/66519428

QUESTION

Problem reading pdf file for azure form recognizer

Asked 2021-Jun-02 at 13:12

I am very new to using Azure. I am trying to extract data from a pdf using Azure Form Recognizer built-in model. For that, I have taken the code from the Microsoft documentation for python and trying to implement in jupyter notebook. The pdf is in my local computer in the same directory where my .ipynb file is. But the problem is this line of code is not executing. Is it the correct way of specifying the pdf file or am I doing something wrong. Please help. Thanks in advace :)

...

ANSWER

Answered 2021-Jun-02 at 13:12

Try this :

Source https://stackoverflow.com/questions/67796601

QUESTION

Why does my UITapGestureRecognizer does not get called when animating the UIView?

Asked 2021-Jun-02 at 08:12

I made a toast view with a UIImageView in it, what I want to do is everytime the user taps the image view, the toast dismisses itself. Naturally I configured a UITapGestureRecognizer to my image view, but the selector function is not getting called. Here's what I did:

...

ANSWER

Answered 2021-Jun-02 at 06:08

Looks like this occurs because of your animation. View is all the time in animation status and block tap gesture. U can try call it with delay instead of adding delay for your animation.

Source https://stackoverflow.com/questions/67799149

QUESTION

Unhandled Exception when using url launcher in flutter

Asked 2021-May-30 at 20:18

RichText(
    text: TextSpan(
      children: [
        TextSpan(
          text: "Soumik's LinkedIn Profile",
          style:
              TextStyle(fontSize: 20.0, color: Colors.blue),
          recognizer: TapGestureRecognizer()
            ..onTap = () async {
              var url =
                  "https://www.linkedin.com/in/soumik-mukherjee-438b451b5/";
              if (await canLaunch(url)) {
                await launch(url);
              } else {
                throw "Failed to open LinkedIn";
              }
            },
        )
      ],
    ),
  ),

...

ANSWER

Answered 2021-May-30 at 20:18

I assume you have Android 11 installed on your POCO X2, which is API level 30.

Here is the documentation for the canLaunch function: https://pub.dev/documentation/url_launcher/latest/url_launcher/canLaunch.html.

The documentation says: "On Android (from API 30), canLaunch will return false when the required visibility configuration is not provided in the AndroidManifest.xml file. For more information see the Managing package visibility article in the Android docs."

Therefore I assume that you did not provide the visibility configuration in the AndroidManifest.xml file which causes canLaunch to return false.

Source https://stackoverflow.com/questions/67750986

QUESTION

I am getting lookup error in google recognition

Asked 2021-May-29 at 05:55

I am trying to convert speech to text using the following code in Python. I have installed the speech_recognition library and also pyaudio.

...

ANSWER

Answered 2021-May-29 at 05:55

Try this1

Source https://stackoverflow.com/questions/67747868

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install reCOGnizer

You can download it from GitHub.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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