svart | API for use | Genomics library

 by   exomiser Java Version: 2.0.0-RC5 License: No License

kandi X-RAY | svart Summary

kandi X-RAY | svart Summary

svart is a Java library typically used in Artificial Intelligence, Genomics applications. svart has no bugs, it has no vulnerabilities, it has build file available and it has low support. You can download it from GitHub, Maven.

svart - (structural) variant tool =
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            kandi-support Support

              svart has a low active ecosystem.
              It has 7 star(s) with 1 fork(s). There are 6 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              There are 7 open issues and 44 have been closed. On average issues are closed in 43 days. There are 2 open pull requests and 0 closed requests.
              It has a neutral sentiment in the developer community.
              The latest version of svart is 2.0.0-RC5

            kandi-Quality Quality

              svart has 0 bugs and 0 code smells.

            kandi-Security Security

              svart has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              svart code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              svart does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              svart releases are available to install and integrate.
              Deployable package is available in Maven.
              Build file is available. You can build the component from source.
              Installation instructions are not available. Examples and code snippets are available.
              It has 6421 lines of code, 847 functions and 75 files.
              It has medium code complexity. Code complexity directly impacts maintainability of the code.

            Top functions reviewed by kandi - BETA

            kandi has reviewed svart and discovered the below as its top functions. This is intended to give you an instant insight into svart implemented functionality, and help decide if they suit your requirements.
            • Returns a mapping between amino acids .
            • Validates the coordinates of a contig .
            • Resolve the breakend variant
            • Left shift a reference sequence .
            • Locate the genome report URL
            • Parses the header lines .
            • Given a collection of Contigs generate a map with the names of each contig .
            • Checks that the change length is legal .
            • Returns a breakend instance for the given coordinate system .
            • String representation of this BreakendVariantVariant
            Get all kandi verified functions for this library.

            svart Key Features

            No Key Features are available at this moment for svart.

            svart Examples and Code Snippets

            No Code Snippets are available at this moment for svart.

            Community Discussions

            QUESTION

            ReactJs json map returning undefined after loading
            Asked 2022-Mar-24 at 19:52

            So I'm fetching an API call which I'm then trying to iterate over in order to display as a list. My code so far is:

            ...

            ANSWER

            Answered 2022-Mar-24 at 19:52

            I think the problem is with the way fetch api's promise is handled. .then((results) => console.log(results)) seems to return undefined and the following .then is receiving data as undefined. Please try like below and let me know if it works!

            Source https://stackoverflow.com/questions/71607417

            QUESTION

            How to make the article above cover the article below when it gets mor height?
            Asked 2022-Feb-07 at 12:50

            I need some help when hovering over article , i want to cover the article below it instead of pushing the whole next row, i tried to give it some padding and then heigh but i'm getting the same result. I tried also with Jquery to use .hover() function and it gave the same result.

            The whole container has a display flex , and every article has a width and height , and when hovering over the article it gets more height. The article without hovering has a 480px and then when hovering 500px

            ...

            ANSWER

            Answered 2022-Feb-07 at 12:50

            Edit here is an example using javascript

            Source https://stackoverflow.com/questions/71010153

            QUESTION

            How do I make the placeholder text of a text input randomly change on page refresh using only basic JS (NO jQuery please)
            Asked 2021-Dec-07 at 09:58

            This one ALMOST helped, but then I tried it and didn't understand, like at ALL Random/new text on page refresh and page load Current code in the HTML File relating to this:

            ...

            ANSWER

            Answered 2021-Dec-07 at 08:44

            You have defined function newQuote, but it is never called.

            To call it whenever the page is loaded, add the following statement to the end of your script.js file:

            Source https://stackoverflow.com/questions/70256595

            QUESTION

            Speedup finding differing and new rows in 2 dataframes
            Asked 2021-Jul-27 at 08:35

            I'm working on a python script to perform the following tasks.

            1. Creates pandas df and finds matches based on the sku number.
            2. Compares the sku rows in the 2 df's
            3. Finds the diff in price and quantity between the 2 sources
            4. Outputs a new df and CSV with the found diffs

            The CSV has more than 70k rows. A subset of the dataset for supplier.csv

            ...

            ANSWER

            Answered 2021-Jul-26 at 16:33

            first get both dataframes to a single dataframe df with headers "supplier_row_price","local_row_price","supplier_row_quantity","local_row_quantity"

            Source https://stackoverflow.com/questions/68532754

            QUESTION

            Merged 2 List into Dictionary without losing any Element in Python
            Asked 2021-Mar-17 at 07:16

            I have 2 list with the length value of 35 in total both listA and listB. However when I merged the 2 list one of the element is gone and the length become lesser becomes 33. is there any way to make 2 list into a dict without losing any element? I tried the zip and normal for loop but still I lost something.

            ...

            ANSWER

            Answered 2021-Mar-17 at 07:16

            listA contains two duplicated items ('Material' and 'Typ'). Dictionaries cannot have duplicated keys which explains why you are seeing less entries in your dict.

            If you have duplicated keys, the best approach would be to make the value of the dictionary a list instead of a single item created as follows:

            The dictionary then has 33 keys but 35 values as the entries for 'Typ' and 'Material' contain 2 items in the list.

            Source https://stackoverflow.com/questions/66668325

            QUESTION

            Postgres how to find rows where in jsonb type column contains key with array which contain some value with or condition
            Asked 2020-Jun-09 at 10:54

            I use PostgreSQL 11.8 and faced task, where I need save many sizes for product and need search by sizes too. Before have structure without nested, only one level, without multiply SIZE key

            ...

            ANSWER

            Answered 2020-Jun-09 at 10:54

            The @> operator works on nested structures as well. To check whether the array contains 38 or 4, you can use

            Source https://stackoverflow.com/questions/62280685

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install svart

            You can download it from GitHub, Maven.
            You can use svart like any standard Java library. Please include the the jar files in your classpath. You can also use any IDE and you can run and debug the svart component as you would do with any other Java program. Best practice is to use a build tool that supports dependency management such as Maven or Gradle. For Maven installation, please refer maven.apache.org. For Gradle installation, please refer gradle.org .

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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          • HTTPS

            https://github.com/exomiser/svart.git

          • CLI

            gh repo clone exomiser/svart

          • sshUrl

            git@github.com:exomiser/svart.git

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