graph-data-science | Source code for the Neo4j Graph Data Science library | Graph Database library
kandi X-RAY | graph-data-science Summary
kandi X-RAY | graph-data-science Summary
This repository hosts the open sources of the Neo4j Graph Data Science (GDS) library. The GDS library is a plugin for the Neo4j graph database. The library consists of a number of graph algorithms, exposed as procedures and executed in Neo4j. The Neo4j Graph Data Science library is the successor of the Neo4j Graph Algorithms library.
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Top functions reviewed by kandi - BETA
- Estimate the embeddings estimation .
- Filters the nodes based on the given expression .
- Adds a config getter to the constructor .
- Intersects a set of neighbors
- Creates a new relationships builder .
- Imports properties from the index .
- This method can be used to write a graph write operation .
- Validate member .
- Filters a list of relationships that are marked to be processed .
- Adds a batch of rels to the graph .
graph-data-science Key Features
graph-data-science Examples and Code Snippets
Community Discussions
Trending Discussions on graph-data-science
QUESTION
For some reason Neo4j is not recognizing degree centrality on a projection in GDS. I run this query:
...ANSWER
Answered 2021-Dec-01 at 17:42What version of GDS do you have installed? The signature of the procedure might not match the documentation you are using. Run this query to check.
QUESTION
The documentation here https://neo4j.com/docs/graph-data-science/1.1/algorithms/bfs/#algorithms-bfs describes a callable "gds.alpha.bfs.stream".
In order to call that, to the best of my knowledge, it needs to be registered with the embedded DB. Something along the lines of
...ANSWER
Answered 2021-Jun-04 at 20:45The required procedure is conveniently called "TraverseProc" and allows use of both BFS and DFS.
The file doesn't include the name of the callable, either. Discovered it through search of all my neo4j dependencies with
QUESTION
In this tutorial, it has the following example: https://neo4j.com/developer/graph-data-science/applied-graph-embeddings/ where 'embeddingSize' is used for specify the vector length of the embedding.
...ANSWER
Answered 2021-May-12 at 13:31Graph embeddings were introduced in version 1.3 and the tutorial you found is for that version and it uses embeddingSize. Then 2nd link you found is the recent documentation for node2Vec and it is meant for >= 1.4 version. Look at the header of your 2nd link and you will see below
QUESTION
I have a simple graph that looks like this (a couple of persons that gave reviews to movies)
...ANSWER
Answered 2021-Feb-26 at 19:17The problem is that the "rating" property is stored as a string. What you can do is cast it first as a float and then run the exact same GDS query.
So, first casting the rating property to a float:
QUESTION
The Neo4j Data Graph Science library has an Shortest Path algorithm (https://neo4j.com/docs/graph-data-science/current/alpha-algorithms/shortest-path/). The following sequence is the example algorithm which works for my project:
...ANSWER
Answered 2021-Jan-09 at 20:41You will need to use cypher projection to filter the subgraph.
QUESTION
I'm coming from the RDF world where named graphs are persistent and can be used like a collection of triples. Moreover you can query against one single named graph or over the whole triplestore. I'm looking for the same features (or a workaround to achive them) in Neo4j.
Neo4j's Graph Catalog is well documented. As I understood, named graphs in Neo4j are stored entirely in-memory (so lost after a restart) with a subset of nodes you define for analytic purpose.
Is there a way to create persistents named graphs in Neo4j? A graph that is stored in the disk with the data and that permits to fast access to a subset of nodes (nodes can be added or removed from the named graph).
...ANSWER
Answered 2020-Nov-13 at 19:06You could give every node in the same "named graph" the same label. Since a node can have multiple labels, this does not prevent you from using other labels for other purposes as well.
QUESTION
I have a collection of nodes that make up a DAG (directed acyclic graph) with no loops guaranteed. I want to store the nodes in a database and have the database execute a search that shows me all paths between two nodes.
For example, you could think that I have the git history of a complex project.
Each node can be described with a JSON object that has:
...ANSWER
Answered 2020-Sep-27 at 11:43The Graph Data Science library pathfinding algorithms are designed to find the shortest weighted paths and use algorithms similar to Dijkstra to find them. In your case, it seems that you are dealing with a directed unweighted graph and you could use the native cypher allShortestPath
procedure:
An example would be:
QUESTION
Creating a named graph from the main Neo4j Graph is documented. Beside, one also knows how to list, drop, check if a named graph already exists, e.g. CALL gds.graph.exists('my-store-graph') YIELD exists;
However, I wonder if there is any method for cypher-query against the just created named graph?
One workaround is to push this named graph into an offline/empty Neo4j Graph, i.e. CALL gds.beta.graph.export('my-graph', { dbName: 'mydatabase' })
. However, this method is less convenient because we often want to check if the named graph is projected correcly before applying, e.g. PageRank on it. And the projection can be a trial-and-error cycle.
ANSWER
Answered 2020-Jun-04 at 06:16There is currently no other way of querying the named graph other than the workaround you already found.
However, there are additional functions, e.g. gds.util.nodeProperty
that allow you to access a node property in the named graph without writing it back to Neo4j. An example for querying a score
property could look like this:
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
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Install graph-data-science
You can use graph-data-science like any standard Java library. Please include the the jar files in your classpath. You can also use any IDE and you can run and debug the graph-data-science component as you would do with any other Java program. Best practice is to use a build tool that supports dependency management such as Maven or Gradle. For Maven installation, please refer maven.apache.org. For Gradle installation, please refer gradle.org .
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