cl1 | Overlapping clustering algorithm | Genomics library

by ntamas Java Version: 1.2 License: No License

X-Ray Key Features Code Snippets Community Discussions(10)Vulnerabilities Install Support

kandi X-RAY | cl1 Summary

cl1 is a Java library typically used in Artificial Intelligence, Genomics applications. cl1 has no bugs, it has no vulnerabilities and it has low support. However cl1 build file is not available. You can download it from GitHub.

Overlapping clustering algorithm for biological and non-biological networks alike

Support

Quality

Security

License

Reuse

Support

cl1 has a low active ecosystem.

It has 7 star(s) with 11 fork(s). There are 3 watchers for this library.

It had no major release in the last 12 months.

There are 3 open issues and 6 have been closed. On average issues are closed in 41 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of cl1 is 1.2

Quality

cl1 has 0 bugs and 0 code smells.

Security

cl1 has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

cl1 code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

cl1 does not have a standard license declared.

Check the repository for any license declaration and review the terms closely.

Without a license, all rights are reserved, and you cannot use the library in your applications.

Reuse

cl1 releases are available to install and integrate.

cl1 has no build file. You will be need to create the build yourself to build the component from source.

Top functions reviewed by kandi - BETA

kandi has reviewed cl1 and discovered the below as its top functions. This is intended to give you an instant insight into cl1 implemented functionality, and help decide if they suit your requirements.

Determines the best action to be applied
Checks if the given node is a cut vertex of the nodeset
Restricts the traversal to the specified subgraph
User pressed the file
Construct the parameters panel
Construct the panel of algorithm parameters
Performs the action on the chosen network
Called when the cluster is clicked
Called when a ClusterONE is pressed
Performs the action on the CyNetwork
Edit the file
Called when the cluster selection has changed
Initializes the cluster popup menu
Update node set details
Converts this object into a HTML representation
Called when a cluster has been calculated
Returns the layout of the graph
Creates a clusterone result
Compares two nodes
Read a graph from the given reader object
Gets the ranks of the given array
Reads a graph from the given reader
Find all nodes that overlap the provided similarity function
Main loop
Initialize this panel
Initialize the options object

Get all kandi verified functions for this library.

cl1 Key Features

No Key Features are available at this moment for cl1.

cl1 Examples and Code Snippets

No Code Snippets are available at this moment for cl1.

Community Discussions

Trending Discussions on cl1

Multiply columns by factor depending on column ID

How to set height of ScrollView in Android?

Commodity Term Structure Data from Bloomberg

Circular progress bar with arrow

How can I save figures in matplotlib correctly?

Quarkus - configure logging with kubernetes cluster

Use PutText to display temperature value on video stream

Find values in a for each loop using .Find()

using varialbles to call marker and update options wont work

Creating Hierarchical checkbox tree view in tkinter using Python

QUESTION

Multiply columns by factor depending on column ID

Asked 2021-Jun-14 at 19:08

a <- structure(c(1017, 63, 9184, 9782, 42, 1467, 84, 11829, 11989, 
49, 1459, 93, 11399, 11302, 42, 188, 14, 1530, 1463, 7, 189, 
20, 1647, 1569, 6), .Dim = c(5L, 5L), .Dimnames = list(c("NC_013663.1_297_-", 
"NC_013663.1_553_-", "NC_013663.1_553_+", "NC_013663.1_554_-", 
"NC_013663.1_555_-"), c("CL1", "CL2", "CL3", "CL4", "CL5")))

...

ANSWER

Answered 2021-Jun-14 at 19:08

Get the index of columns with substring L1 to L3 using grep. Extract the columns, multiply with the value 0.1343109 and update by assigning back to the columns. (Note - multiplying by 1 returns the same value, thus it is left as such)

Source https://stackoverflow.com/questions/67975908

QUESTION

How to set height of ScrollView in Android?

Asked 2021-Jun-11 at 05:59

I am very new in Android development I have designed the xml below

I started with creating a ConstraintView inside of that I created a ConstraintView with some fixed height and ScrollView.

I am facing problem to set the height of Scrollview. How to set ScrollView should start just below to ConstraintView

...

ANSWER

Answered 2021-Jun-11 at 05:59

I am not sure what is your end layout goal here, but you can simply set a top to bottom constraint on your ScrollView like you have done on your RecyclerView. So just add the following in your ScrollView XML

Source https://stackoverflow.com/questions/67931884

QUESTION

Commodity Term Structure Data from Bloomberg

Asked 2021-May-26 at 19:16

I am looking for a way to download daily WTI crude oil (CL) term structure data from Bloomberg in the Excel Add-in.

My goal is to create a table that looks like this: For each futures contract, I want the lat price and the days to maturity.

Date CL1 CL2 ... 1.1.12 PX_Last FUT_ACT_DAYS_EXP PX_Last FUT_ACT_DAYS_EXP

I have tried the FUT_ACT_DAYS_EXP code but for historical price series it is not available. Is there maybe a different way to receive the term structure data with days to maturity from BB?

Many thanks!

...

ANSWER

Answered 2021-May-26 at 16:37

It's been a few years since I looked at this but you are using generic tickers, whereas FUT_ACT_DAYS_EXP would most likely expect an actual contract, e.g. CLU1. There is a field that you can use to convert generic to actual as a time series, i.e. with BDH, but you would have to check that on FLDS. Once you have that you can use BDH to pull in price and days to expiry. Bear in mind that with one BDH per date this would be a very inefficient approach with regards to limits .

Alternatively ask HELP HELP and they should give you a solid answer. Unfortunately I don't access to the terminal anymore but I used to be very involved in building such analytics.

Source https://stackoverflow.com/questions/67705678

QUESTION

Circular progress bar with arrow

Asked 2021-May-14 at 14:44

I've been trying to create a circular progress bar that has an arrow at the front.

This is what I have so far

HTML

...

ANSWER

Answered 2021-May-11 at 16:24

You cannot get to the result you want by starting from this code sample.

At animation start, the visible colored arc is mostly hidden by a thick black stroked arc over-drawn on it. This arc has a stroke-dasharray that is then animated so that the unstroked part of the dasharray is progressively shifted along the curve to reveal the underlying colored arc. Because the reveal is created by the movement of a dasharray, there is no way to adjust the position of a marker (which is how you'd normally do this) so that it follows the reveal edge (at least using CSS).

You'll have to completely restructure the SVG and do the animation in JavaScript or SMIL.

Source https://stackoverflow.com/questions/67489417

QUESTION

How can I save figures in matplotlib correctly?

Asked 2021-May-13 at 23:51

I have been trying to save my figures using the following code, but the figure being saved in the directory is just blank. What mistake am I doing?

The code I am using is:

...

ANSWER

Answered 2021-May-13 at 22:39

You should switch the order of the last 2 lines. If you show the plot first, it is 'consumed' and there is nothing to save.

Source https://stackoverflow.com/questions/67526952

QUESTION

Quarkus - configure logging with kubernetes cluster

Asked 2021-Apr-30 at 13:03

According to the official resource, logging configuration relies on application.properties file.

Now I need to have several configuration according to the cluster in use (let's say we have the typical dev, staging and production environments, thus dev should have a DEBUG level and production at least INFO).

At first I thought using Kubernetes ConfigMaps, but I can't see any connection with quarkus logging.

How can I solve this issue?

EDIT:

This is my ConfigMap

...

ANSWER

Answered 2021-Apr-22 at 16:36

There are 2 ways to use a ConfigMap in Quarkus to read runtime configuration.

The first is to let Quarkus quary the API server using the quarkus-kubernetes-config extension which is described here.

The second way to configure the Kubernetes Deployment to turn ConfigMap values into environment variables for the Pod. This can be done with the quarkus-kubernetes extension which is described here.

So you would add the proper quarkus logging configuration (i.e a key value pair) in the ConfigMap and then use one of the above methods to use that at runtime

Source https://stackoverflow.com/questions/67217011

QUESTION

Use PutText to display temperature value on video stream

Asked 2021-Apr-16 at 13:38

I'm using FLIR Lepton camera to capture the thermal image, then try to display the temperature on the image using PutText method but getting very strange result. Any advice is appreciated in advance.

Code:

...

ANSWER

Answered 2021-Apr-16 at 02:25

Have a look here:

Source https://stackoverflow.com/questions/67114125

QUESTION

Find values in a for each loop using .Find()

Asked 2021-Apr-15 at 10:04

I am looking for a loop that copies the value for every matching input value and not just stuck on the first it finds. So I input into a combox some id number which I want to be found in 2 workbooks (wb FC and CL1) and copy the value to its right and paste in another workbook. In FC that value will appear only once but in CL1 it can appear many times. The loop I tried stucks on coping it just for the first found value and I want it to copy it for every matched value.

Here is what I came up with:

...

ANSWER

Answered 2021-Apr-15 at 10:04

Use FindNext to Find Multiple Matches

Note that the Find method has many more arguments e.g. LookAt (a whole or a partial match) which is crucial in your case. Also, the LookIn argument set to the parameter xlValues may fail to find a match if rows are hidden. Therefore the parameter xlFormulas is most often a safer choice.
FindNext method

Source https://stackoverflow.com/questions/67105801

QUESTION

using varialbles to call marker and update options wont work

Asked 2021-Apr-13 at 05:16

i have to change my marker options by calling the variables assigned to them but heres the problem.

...

ANSWER

Answered 2021-Apr-13 at 05:16

You are creating a String with var clickedMarker = 'CL'+id; and with that you will not able to access the variable CL1. You can use a list to map the variable name with the variable self.

Source https://stackoverflow.com/questions/67061868

QUESTION

Creating Hierarchical checkbox tree view in tkinter using Python

Asked 2021-Apr-06 at 16:31

import tkinter.tix as Tix

class View(object):
    def __init__(self, root):
        self.root = root
        self.makeCheckList()

    def makeCheckList(self):
        self.cl = Tix.CheckList(self.root,height=200,width=400)
        self.cl.pack()
        self.cl.hlist.add("C", text="GeeksforGeeks")
        self.cl.hlist.add("C.CL1", text="Computer Science")
        self.cl.hlist.add("C.CL1.Item1", text="Algorithm")
        self.cl.hlist.add("C.CL1.Item2", text="Data Structures")
        self.cl.hlist.add("C.CL2", text="Gate Paper")
        self.cl.hlist.add("C.CL2.Item1", text="2018 paper")
        self.cl.hlist.add("C.CL2.Item2", text="2019 paper")
        self.cl.hlist.add("C.CL3", text="Programming language")
        self.cl.hlist.add("C.CL3.Item1", text="Python")
        self.cl.hlist.add("C.CL3.Item2", text="java")

        self.cl.setstatus("C", "off")
        self.cl.setstatus("C.CL1", "off")
        self.cl.setstatus("C.CL1.Item1", "off")
        self.cl.setstatus("C.CL1.Item2", "off")

        self.cl.setstatus("C.CL2", "on")
        self.cl.setstatus("C.CL2.Item1")
        self.cl.setstatus("C.CL2.Item2")

        self.cl.setstatus("C.CL3", "off")
        self.cl.setstatus("C.CL3.Item1", "off")
        self.cl.setstatus("C.CL3.Item2", "off")
        self.cl.autosetmode()

def main():
    root = Tix.Tk()
    view = View(root)
    root.update()
    root.mainloop()

if __name__ == '__main__':
    main()

...

ANSWER

Answered 2021-Apr-06 at 16:31

There doesn't seem to be a built-in method to do that. You might need to loop through children to set the checkbox

Sample code that has two methods select_child for selecting the first level children and select_children for selecting all the children.

Source https://stackoverflow.com/questions/66964420

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install cl1

You can download it from GitHub.
You can use cl1 like any standard Java library. Please include the the jar files in your classpath. You can also use any IDE and you can run and debug the cl1 component as you would do with any other Java program. Best practice is to use a build tool that supports dependency management such as Maven or Gradle. For Maven installation, please refer maven.apache.org. For Gradle installation, please refer gradle.org .

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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