biology | genomics biochemistry biotechnology cell biology | Genomics library
kandi X-RAY | biology Summary
kandi X-RAY | biology Summary
An exploration of topics in various areas of biology using code.
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- Plot the mutual information
- Plots the info content at each position
- Calculates the mutual information for a given list of positions
- Parse alignment file
- Calculate the frequencies for each MSA position
- Compute support for svm
- Performs a DBScan clustering
- Finds all the neighbors of the given distance function
- Return the value associated with key k
- Add an atom
- Search pattern in text
- Return a list of bad characters for the given string
- Count the number of letters between a given step
- Get the information content of each amino acid sequence
- Calculate the highest minimum block of 10s
- Compute the likelihood of a given transition matrix
- Compute the forward probability matrix for each observation
- Performs simple clustering
- Add a gospergider gun
- Calculates salesman distance
- Compute the distance between two points
- Calculate the first occurrence of a string
- Transform the input string to a single string
- Calculate the distance between cities
- Inverse of the inverse of a string
- The winner of an agent
biology Key Features
biology Examples and Code Snippets
Community Discussions
Trending Discussions on biology
QUESTION
I have a dataframe with thousands of rows, some columns all have ratings like A,B,C,D. I am trying to do some machine learning and would like to give the ratings certain values, Like A=32,B=16,C=4,D=2. I have read some post on using factorize and labelEncoder
I got a simple method to work (while trying to explain the problem) from the link, but would like to know how to use other methods, I don't know how to tell those methods to use certain values, they seem just to put their own values to the data. The method below works if only a few columns need to be transformed.
...ANSWER
Answered 2021-Jun-13 at 14:25If you need to transform a relatively large number of columns, probably you don't want to quote all the column names one by one in the program codes. You can do it this way:
Assuming the column Studentid is not going to be transformed:
QUESTION
Scenario : From the following XML, Concatenate the marks and subject of a student with a "-" and put it as output in JSON.
Input:
...ANSWER
Answered 2021-Jun-13 at 14:28This script produces the expected result.
QUESTION
We are given a data frame that may look like this (I am sorry I wasn't able to show the data frame given the code below):
...ANSWER
Answered 2021-Jun-12 at 11:40try:
QUESTION
I am trying to get aggregate Marks of each student grouped by the department and sorted by their aggregate marks. This is how I am trying.
Student class properties: ...ANSWER
Answered 2021-Jun-11 at 14:06Firstly, in your Map>> the map inside the list would contain only one key-value pair. So I would suggest you to return Map>>. (Entry in java.util.Map)
Also, create a getAverageMarks in your student class which would return:
QUESTION
I am trying to convert all ICD codes in a tab separated file to Phecodes (based on a ICD-Phecode conversion table tab separated file) for a biology bioinformatics project. I found a good starting point with the code from the below stackoverflow post:
...ANSWER
Answered 2021-Jun-07 at 14:28The loop has to be outside of the condition. Ie. you want to check for each column, not only for $1 in a. Consider a more readable multiline format.
QUESTION
I have a tuple which its elements are dictionaries. i.e.
...ANSWER
Answered 2021-Jun-06 at 05:15You can use list comprehension with enumerate.
QUESTION
I made a dropdown using Button and a Popper using Material UI components where you can click on the button and get a list of subjects to choose from.
To make the popper disappear either we can click on the button again or use a component which listens to click event and closes the Popper.
Now I've to make the list capable of drag and drop feature so I use the react-beautiful-dnd npm package.
But the doesn't seem to work when I include , and components.
Can anyone help me figure it out?
Here's the code without drag and drop feature. CodeSandbox link https://codesandbox.io/s/gallant-newton-mfmhd?file=/demo.js
ANSWER
Answered 2021-Jun-05 at 12:17You need to have your ClickAwayListener at the top when you are using the Drag and Drop.
QUESTION
Student table: id, name, class Score table: student_id, score, discipline i tried:
...ANSWER
Answered 2021-Jun-03 at 12:01Use the SQL RANK function and pick rows with rank value 1. it should do the trick. Check following link for details
QUESTION
I have a bigger multidimensional hash which consist of hashes and array within it, I'm able to get the array of hashes out of that which is only useful of the entire larger hash, now I'm trying to print a specific element or values of a key.
Original Hash
...ANSWER
Answered 2021-Jun-02 at 17:57Let's start by avoiding needless copies of hashes and arrays. We're also going to use better variable names than AoH, href and key.
QUESTION
I have a Blog model that looks like this:
ANSWER
Answered 2021-Jun-02 at 14:50Why not just add an if statement like so?
template.html
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Install biology
You can use biology like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
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