nextsv | NextSV3 uses Minimap2 to do read mapping | Genomics library

 by   Nextomics Python Version: v3.0.2 License: MIT

kandi X-RAY | nextsv Summary

kandi X-RAY | nextsv Summary

nextsv is a Python library typically used in Artificial Intelligence, Genomics applications. nextsv has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. However nextsv build file is not available. You can download it from GitHub.

NextSV2 uses two aligners (Minimap2 and NGMLR) to do read mapping and uses Sniffles to do SV calling.
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            kandi-support Support

              nextsv has a low active ecosystem.
              It has 28 star(s) with 9 fork(s). There are 7 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              There are 6 open issues and 12 have been closed. On average issues are closed in 38 days. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of nextsv is v3.0.2

            kandi-Quality Quality

              nextsv has 0 bugs and 0 code smells.

            kandi-Security Security

              nextsv has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              nextsv code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              nextsv is licensed under the MIT License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              nextsv releases are available to install and integrate.
              nextsv has no build file. You will be need to create the build yourself to build the component from source.
              Installation instructions, examples and code snippets are available.
              It has 806 lines of code, 37 functions and 1 files.
              It has high code complexity. Code complexity directly impacts maintainability of the code.

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            nextsv Key Features

            No Key Features are available at this moment for nextsv.

            nextsv Examples and Code Snippets

            No Code Snippets are available at this moment for nextsv.

            Community Discussions

            QUESTION

            How to rename sheets in a workbook with exceptions?
            Asked 2020-Jul-31 at 20:34

            I intend to rename all the sheets with the cell "G2" value except the two sheets called "Main" and "Fixed".

            The code keeps renaming the two sheets.

            ...

            ANSWER

            Answered 2020-Jun-16 at 09:12

            Your code had 3 mistakes

            1. You were using Activate and Active which produced the second error. Read this on how to avoid these.
            2. You were checking the name of the ActiveSheet before the ws.Activate so it would always check the previous sheet.
            3. Your conditions were with Or. Main <> Fixed so it would change their name anyways because Main is not Fixed and mets the second part of your Or and viceversa. Use And to force the code check that both conditions are met.

            This is the code without using Activate or Select:

            Source https://stackoverflow.com/questions/62404555

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install nextsv

            Prerequisites: sniffles, samtools (version 1.3 or later), gcc/g++(>=4.8.2), python 2.7.

            Support

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            CLONE
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            https://github.com/Nextomics/nextsv.git

          • CLI

            gh repo clone Nextomics/nextsv

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            git@github.com:Nextomics/nextsv.git

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