RepSeP | Reproducible Self-Publishing - Demo Publications
kandi X-RAY | RepSeP Summary
kandi X-RAY | RepSeP Summary
The Reproducible Self Publishing toolkit demonstrates how to reuse your favourite data analysis workflows in order to seamlessly include quasi-dynamic publication-quality output (e.g. figures, tables, or statistic reports) in the most common science communication formats. Currently we provide examples for:. In these examples, analysis does not have to be initiated manually, and output elements do not have to be copied, manually scaled, styled, or otherwise manipulated. Data analysis is kept in one and only one place, and configurable styling is applied programmatically at the document or output element level. Data and code dependencies are monitored for update via checksums, and are either provided or specified, so that both the toolkit in its present incarnation - as well as your own derivatives - can be reproduced locally and autonomously by your colleagues, reviewers, students, and everybody else. As no binaries are tracked, publications built analogously to our examples are excellently suited for collaborative editing and version tracking, e.g. via Git.
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Top functions reviewed by kandi - BETA
- Estimate support for the plot
- Calculate the kernel density estimate
- Fits a kernel of a Gaussian kernel
- Scale area
- Plot a swarm plot
- Draw the arm
- Draws swarm coordinates
- Renders the swarm plot
- Plot a stripplot
- Add legend data
- Draws the stufflot
- Draw the strip plot
- Plot a count plot
- Draws the bar chart
- Renders a list of confintions
- Draw the horizontal bar chart
- Plot a point plot
- Draw the estimate points
- Render the plot
- Calculate the volume change factor
- Return an inline version of an object
- Return an inline line
- Convert a floating point number to a latex string
- Plot a violin plotter
- Plot a factor plot
- Plot a box plot
- Plot a bar plot
RepSeP Key Features
RepSeP Examples and Code Snippets
Community Discussions
Trending Discussions on RepSeP
QUESTION
I have this parser:
...ANSWER
Answered 2020-May-26 at 20:44First of all, half the combinatorics you use are created as Parser[String]
, and it's your type annotation that upcast them to Parser[Any]
(which is allowed because of covariance, but also completely useless in this case).
So you actually have something like:
QUESTION
I am trying to use scala.util.parsing.combinator
to parse some MIPS code and my code works for each item (i.e. label, instruction, directive and etc) but it does not work for multiple items/lines. I think the separator regex which I pass to repsep
function does not work.
For example, I can parse label str:
but I cannot parse str: .asciiz "Hello world!"
ANSWER
Answered 2020-Apr-15 at 15:05It seems that you're using scala.util.parsing.combinator.RegexParsers
and it skips whitespaces by default. You should override it
QUESTION
I'm trying to parse the following document:
...ANSWER
Answered 2018-May-04 at 22:06The reason for the error is that line
and eol
are defined as normal class field val
s, but they are used in lines
before their definition. The code that assigns values to class fields is executed sequentially in the constructor, and line
and eol
are both still null
, when lines
is being assigned.
To solve this define line
and eol
as lazy val
s or def
s, or just put them before lines
in the code.
The parser itself also has some problems. By default Scala parsers automatically ignore all whitespace, including EOLs. Considering that regexp .*
without any flags does not include EOLs, line
naturally means "the whole line until the line break", so you don't have to analyze EOLs at all.
Secondly, the lines
parser as defined is greedy. It will happily consume everything including the final ##
. To make it stop before end
you can, for example, use the not
combinator.
With all the changes, the parser looks like this:
QUESTION
Recently, I am learning the Scala parser combinator. I would like to parse the key
in a given string. For instance,
Trial ...val expr1 = "local_province != $province_name$ or city=$city_name$ or people_number<>$some_digit$"
// ==>
List("local_province", "city", "people_number")
val expr2 = "(local_province=$province_name$)"
// ==>
List("local_province")
val expr3 = "(local_province=$province_name$ or city=$city_name$) and (lib_name=$akka$ or lib_author=$martin$)"
// ==>
List("local_province", "city", "lib_name", "lib_author")
ANSWER
Answered 2018-Apr-20 at 15:14I notice that the
KeyParser
only works for"="
This isn't quite true. It also works for !=
, <
and >
. The ones it doesn't work for are >=
, <=
and <>
.
More generally it does not work for those operators which have a prefix of them appear in the list of alternatives before them. That is >=
is not matched because >
appears before it and is a prefix of it.
So why does this happen? The |
operator creates a parser that produces the result of the left parser if it succeeds or of the right parser otherwise. So if you have a chain of |
s, you'll get the result of the first parser in that chain which can match the current input. So if the current input is <>$some_digit$
, the parser logicOps
will match <
and leave you with >$some_digit$
as the remaining input. So now it tries to match value
against that input and fails.
Why doesn't backtracking help here? Because the logicOps
parser already succeeded, so there's nowhere to backtrack to. If the parser were structured like this:
QUESTION
I'm currently writing a Parser
which extends JavaTokenParsers
in Scala
which should amongst other things parse following Grammar
:
ANSWER
Answered 2017-May-24 at 22:09repsep(expr, ",")
gives you a Parser[List[Expression]]
and isn't that enough?
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install RepSeP
The most precise description of the dependency graph (including conditionality) can be extracted from the RepSeP ebuild. Alternatively you may refer to the following list:.
matplotlib
numpy
statsmodels (>=0.9.0)
pythontex (>=0.16)
texlive-latex
graphviz
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