rtree | Rtree : spatial index for Python GIS ¶ | Computer Vision library

 by   Toblerity Python Version: 1.1.0 License: MIT

kandi X-RAY | rtree Summary

kandi X-RAY | rtree Summary

rtree is a Python library typically used in Artificial Intelligence, Computer Vision applications. rtree has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has low support. You can install using 'pip install rtree' or download it from GitHub, PyPI.

RTree is a Python package with bindings for [libspatialindex] Wheels are available for most major platforms, and rtree with bundled libspatialindex can be installed via pip:.

            kandi-support Support

              rtree has a low active ecosystem.
              It has 550 star(s) with 125 fork(s). There are 34 watchers for this library.
              There were 1 major release(s) in the last 6 months.
              There are 25 open issues and 138 have been closed. On average issues are closed in 207 days. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of rtree is 1.1.0

            kandi-Quality Quality

              rtree has 0 bugs and 0 code smells.

            kandi-Security Security

              rtree has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              rtree code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              rtree is licensed under the MIT License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              rtree releases are available to install and integrate.
              Deployable package is available in PyPI.
              Build file is available. You can build the component from source.
              Installation instructions are not available. Examples and code snippets are available.
              rtree saves you 1027 person hours of effort in developing the same functionality from scratch.
              It has 2444 lines of code, 217 functions and 12 files.
              It has medium code complexity. Code complexity directly impacts maintainability of the code.

            Top functions reviewed by kandi - BETA

            kandi has reviewed rtree and discovered the below as its top functions. This is intended to give you an instant insight into rtree implemented functionality, and help decide if they suit your requirements.
            • Get the closest object to the given coordinates
            • Get the nearest TP nearest to the given coordinates
            • Get objects from the index
            • Yield the ids of the ids of the results
            • Create an index from the given stream
            • Return a list of lists that are the same length
            • Serialize a Python object
            • Load a byte array from the page
            • Load a byte array
            • Get the bounds of the index
            • Get bounds from a bounding box
            • Returns the items contained in the index
            • Determine if an object contains one or more objects
            • Creates a polygon object
            • Make a feature object
            • Calculate the area of the area
            • Get the object
            • Load the spatial index
            • Create layer definition
            • Gets bounds from leaf_ids
            • Finalize shared library options
            • Store a byte array in the page
            Get all kandi verified functions for this library.

            rtree Key Features

            No Key Features are available at this moment for rtree.

            rtree Examples and Code Snippets

            No Code Snippets are available at this moment for rtree.

            Community Discussions


            Is it possible to bypass pygeos when using geopandas sindex?
            Asked 2022-Mar-24 at 20:36

            I am currently using Geopandas, and I need to search for the k-nearest neigbour efficiently in a data frame. According to the documentation, the implementation of sindex depends on wether or not pygeos is available. Unfortunatly, this change the api for nearest method, which only supports k-nearest when using rtree implementation instead of pygeos.

            Is there a way to force geopandas to bypass pygeos and use rtree instead?



            Answered 2022-Mar-24 at 20:36

            Yes. From docs:

            You can still toggle the use of PyGEOS when it is available, by:

            • Setting an environment variable (USE_PYGEOS=0/1). Note this variable is only checked at first import of GeoPandas.
            • Setting an option: geopandas.options.use_pygeos = True/False. Note, although this variable can be set during an interactive session, it will only work if the GeoDataFrames you use are created (e.g. reading a file with read_file) after changing this value.

            Source https://stackoverflow.com/questions/71606144


            ggtree: how to label tree branches in the simplest way
            Asked 2022-Mar-17 at 09:26

            I want to label a specific branch (e.g., "Group 1") on the tree, but I didn't found a specific function to do that. Any ideas?



            Answered 2022-Mar-17 at 09:26

            You're not actually using ggtree to plot here. If you wish to draw your tree with ggtree you could do something like this:

            Source https://stackoverflow.com/questions/71507611


            No such file or directory: '/opt/anaconda3/lib/python3.8/site-packages/rtree/lib'
            Asked 2022-Mar-13 at 16:13

            I am trying to build an app from a python file (Mac OS) using the py2app extension. I have a folder with the python file and the "setup.py" file.

            • I first tested the app by running python setup.py py2app -A in the terminal and the dist and build folder are successfully created and the app works when launched.
            • Now when I try to build it non-locally by running the command python setup.py py2app in the terminal, there are various "WARNING: ImportERROR" messages while building and finally a error: [Errno 2] No such file or directory: '/opt/anaconda3/lib/python3.8/site-packages/rtree/lib' error.

              How can I fix this? I've tried to delete anaconda fully as I don't use it but it seems to still want to run through it. Additionally, I have tried to run the build command using a virtual environment but I end up having even more import errors.
              *I Left out a lot of the "skipping" and "warning" lines using "..." for space


            Answered 2022-Mar-13 at 16:13

            The error error: [Errno 2] No such file or directory: '/opt/anaconda3/lib/python3.8/site-packages/rtree/lib' was caused by py2app trying to build the program bundle using a non-existent interpreter. This means that even if you try to uninstall a manager like Anaconda, it still has option logs somewhere on your mac.

            The fix:

            1. Open the terminal and type the command type -a python.
            • You will see similar lines

            Source https://stackoverflow.com/questions/71414043


            PyObjc error while trying to deploy flask app on Heroku
            Asked 2022-Feb-04 at 21:42

            I am trying to deploy my first web app on Heroku however I am getting a PyObjc error while pushing the code. I am doing this on a Mac Machine. This predictive application is developed using Flask. I do not know why this error is occurring as I do not have the PyObjc in my requirements.txt



            Answered 2022-Feb-04 at 21:42

            applaunchservices appears to be Apple-only:

            Simple package for registering an app with apple Launch Services to handle UTI and URL. See Apple documentations for details.

            I suspect you don't need that, either. Did you create your requirements.txt from a pip freeze? There's likely a bunch of stuff in there you don't need.

            I suggest you review that file and remove anything you aren't directly depending on. pip will find transitive dependencies (dependencies your dependencies depend on) and install them automatically.

            Prune that file, commit, and redeploy.

            Source https://stackoverflow.com/questions/70993086


            Construct n-dimensional boost point
            Asked 2022-Jan-30 at 22:11

            Problem: boost/geometry/geometries/point.hpp point template does not provide a way to construct an n-dimensional point type with non-zero values.

            For example:



            Answered 2022-Jan-30 at 22:11

            You are right. The model::point class template doesn't afford direct/aggregate initialization and it's not possible to add that (m_values is private e.g., but also there is optional access-tracking debug metadata that would get out of sync).

            Note the class is documented

            Source https://stackoverflow.com/questions/70918947


            UnsatisfiableError on importing environment pywin32==300 (Requested package -> Available versions)
            Asked 2021-Dec-03 at 14:58

            Good day

            I am getting an error while importing my environment:



            Answered 2021-Dec-03 at 09:22

            Build tags in you environment.yml are quite strict requirements to satisfy and most often not needed. In your case, changing the yml file to

            Source https://stackoverflow.com/questions/70209921


            Python_LIBRARY in CMake NotFound
            Asked 2021-Nov-18 at 20:57

            I'm trying to build the open-source software LMGC90 (https://git-xen.lmgc.univ-montp2.fr/lmgc90/lmgc90_user/-/wikis/compilation) and I have a trouble when I try to use the command >cmake. Details are below:

            CMake Error: The following variables are used in this project, but they are set to NOTFOUND. Please set them or make sure they are set and tested correctly in the CMake files: PYTHON_LIBRARY



            Answered 2021-Nov-18 at 20:57

            You must specify the path to the Python library as:

            Source https://stackoverflow.com/questions/70015338


            Is it possible to use Android Room Database to create an R*Tree table?
            Asked 2021-Oct-16 at 10:20

            I would like to continue using Room, but I see no way to create an Entity that uses rtree. There is @FTS3 and @FTS4 annotations but nothing for RTree that I see. Is it possible to create an Entity using R-Tree?

            I was attempting to do a migration with this code, but I still wouldn't have the Entity for Room...



            Answered 2021-Oct-16 at 10:20

            I believe that currently it is not possible to use RTree's in Room.

            To use RTree you would need an SQLite distribution that is compiled with the option -DSQLITE_ENABLE_RTREE=1.

            Room is an abstract layer over the SQLite that is distributed with the Android device and, I believe, does not have RTree enabled (if it were then I would guess that @RTree annotation would then be available).

            e.g. on API 31 if you try to use you get :-

            Source https://stackoverflow.com/questions/69593568


            Pyinstaller cannot import geopandas
            Asked 2021-Aug-17 at 13:37

            I am trying to use geopandas library from an executable created using pyinstaller. But it is throwing an error about a dll file missing. I can run the script when executing as a python file, but not as an executable file.

            This is the script I am using (named sample.py):



            Answered 2021-Aug-17 at 13:37

            You can add --collect-binaries rtree to the pyinstaller command if
            you're using pyinstaller 4.3 or above.

            The spatial*.dlls are located inside the rtree package:

            Source https://stackoverflow.com/questions/68737684


            CMake Build Help for `pyembree`
            Asked 2021-Aug-01 at 17:24

            I am looking for help building pyembree from source with CMake for Windows. Further details for the history of this question are listed here on GitHub. Windows support for pyembree on conda-forge was just removed, so any help that can be provided would be much appreciated!

            Installation Instructions System

            Tested on:

            OS: Windows 10 x64 Professional, Build 1909 Python: 3.8.10

            1. Install Microsoft Visual C++ 14.X and Windows 10 SDK. These are required for building cython code.

            (NOTE: The version of Microsoft Visual Studio is not the same as the version of Microsoft Visual C++. Visual Studio 2015, 2017, and 2019 all have MSVCv14X build tools. At the time of this writing, installing the Visual Studio 2019 Build Tools with

            MSVCv142 - VS 2019 C++ x64/x86 build tools and Windows 10 SDK (10.0.18362.0)

            components will suffice (select the Desktop development with C++ Workload if installing Visual Studio 2019).

            1. Install vcpkg in C:\\vcpkg and add the path to your System Environment Variables:


            Answered 2021-Aug-01 at 17:24

            CMake is actually not required. For complete instructions, please see my solution on Install pyembree on Windows without Conda #468.

            Source https://stackoverflow.com/questions/68578252

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network


            No vulnerabilities reported

            Install rtree

            You can install using 'pip install rtree' or download it from GitHub, PyPI.
            You can use rtree like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.


            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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