contact_map | Contact map analysis for biomolecules ; based on MDTraj | Genomics library

by dwhswenson Python Version: v0.7.0 License: LGPL-2.1

X-Ray Key Features Code Snippets Community Discussions(1)Vulnerabilities Install Support

kandi X-RAY | contact_map Summary

contact_map is a Python library typically used in Healthcare, Pharma, Life Sciences, Artificial Intelligence, Genomics applications. contact_map has no bugs, it has no vulnerabilities, it has build file available, it has a Weak Copyleft License and it has low support. You can install using 'pip install contact_map' or download it from GitHub, PyPI.

Contact map analysis for biomolecules; based on MDTraj

Support

Quality

Security

License

Reuse

Support

contact_map has a low active ecosystem.

It has 20 star(s) with 9 fork(s). There are 2 watchers for this library.

It had no major release in the last 12 months.

There are 5 open issues and 16 have been closed. On average issues are closed in 110 days. There are 6 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of contact_map is v0.7.0

Quality

contact_map has no bugs reported.

Security

contact_map has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

contact_map is licensed under the LGPL-2.1 License. This license is Weak Copyleft.

Weak Copyleft licenses have some restrictions, but you can use them in commercial projects.

Reuse

contact_map releases are available to install and integrate.

Deployable package is available in PyPI.

Build file is available. You can build the component from source.

Installation instructions, examples and code snippets are available.

Top functions reviewed by kandi - BETA

kandi has reviewed contact_map and discovered the below as its top functions. This is intended to give you an instant insight into contact_map implemented functionality, and help decide if they suit your requirements.

Plot the plot
Plot the axis
Check the number of pixels in the figure
Return a colorbar object
Plot the curve
Get the labels for the concurrence
Writes the installed version
Return the git revision
Return the most common atoms for a given contact pair
Return the index of the most common index
Deserialize a dictionary
Get the arguments of a method
A list of atom indices
Get the version from setup cf file
Slice a trajectory
Returns the first eligible file
Create an argument parser
Build a sequence of contacts from a trajectory
Return a mapping of residue indices to residue indices
Return a dict representation of the object
Get the git version
Returns the most common atoms for a given residue
Build the contact map for a trajectory
Create a contact map from a dictionary
Return contact input
Build contacts per frame
Create a FrequencyFrequency object from a list of contacts

Get all kandi verified functions for this library.

contact_map Key Features

No Key Features are available at this moment for contact_map.

contact_map Examples and Code Snippets

No Code Snippets are available at this moment for contact_map.

Community Discussions

Trending Discussions on contact_map

Gmaps4rails turbolink disable not working - Rails 5

QUESTION

Gmaps4rails turbolink disable not working - Rails 5

Asked 2017-Sep-05 at 10:44

When I click on my contact button in my navbar the map at the bottom of the page is not loading unless I refresh. When I click on the contact button this is what I get:

Notice the console errors it is giving me. I have tried both of these lines within the same link_to tag 'data-no-turbolink' => true and :data => {no_turbolink:'true'}

The only way it works is when I refresh which gives me the correct look:

This is what my navbar code is for the contact portion <%= link_to 'Contact Us', '/contacts', class: "dropdown-toggle", data_toggle: "dropdown", :data => {no_turbolink:'true'} %>

Here is the code for my map in my contact form:

...

ANSWER

Answered 2017-Sep-05 at 10:44

you may cek this link for reference disable turbolink on specific link , for your code above you can try this code below

Source https://stackoverflow.com/questions/46046109

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install contact_map

The easiest way to install is with conda. Conda is a powerful package and environment management system. If you do not already have a highly customized Python environment, we recommend starting by installing conda, either in the full anaconda distribution or the smaller-footprint miniconda. This package is distributed through the conda-forge channel; install it with:. If you don't want to use conda, you can also use pip (via a more complicated process) or do a developer install. See the installation documentation for details.

Support

This package provides tools for analyzing and exploring contacts (residue-residue and atom-atom) from a trajectory generated by molecular dynamics. It builds on the excellent tools provided by MDTraj. Contacts can be an important tool for defining (meta)stable states in processes involving biomolecules. For example, an analysis of contacts can be particularly useful when defining bound states during a binding processes between proteins, DNA, and small molecules (such as potential drugs). The contacts analyzed by Contact Map Explorer can be either intermolecular or intramolecular, and can be analyzed on a residue-residue basis or an atom-atom basis.

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