smof | Explore and analyze biological sequence data | Genomics library

by incertae-sedis Python Version: 2.22.2 License: MIT

X-Ray Key Features Code Snippets Community Discussions(1)Vulnerabilities Install Support

kandi X-RAY | smof Summary

smof is a Python library typically used in Healthcare, Pharma, Life Sciences, Artificial Intelligence, Genomics applications. smof has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has low support. You can install using 'pip install smof' or download it from GitHub, PyPI.

[DOI] smof - Simple Manipulation Of FASTA.

Support

Quality

Security

License

Reuse

Support

smof has a low active ecosystem.

It has 9 star(s) with 1 fork(s). There are 3 watchers for this library.

It had no major release in the last 12 months.

There are 0 open issues and 1 have been closed. On average issues are closed in 20 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of smof is 2.22.2

Quality

smof has 0 bugs and 0 code smells.

Security

smof has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

smof code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

smof is licensed under the MIT License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

smof releases are available to install and integrate.

Deployable package is available in PyPI.

Build file is available. You can build the component from source.

Installation instructions are not available. Examples and code snippets are available.

It has 3672 lines of code, 346 functions and 2 files.

It has medium code complexity. Code complexity directly impacts maintainability of the code.

Top functions reviewed by kandi - BETA

kandi has reviewed smof and discovered the below as its top functions. This is intended to give you an instant insight into smof implemented functionality, and help decide if they suit your requirements.

Create a function to match text
Append a color
Return a reverse complement of a sequence
Reverse the sequence
Generate a genotype generator
Color the color
Process the sequence of colors
Colorize the header
Generate sequence of sequences
Validate arguments
Generate a generator
Parse command line arguments
Generate generator
Validates the given arguments and returns a generator
Get pattern from command line arguments
Generator that yields FASTAEntry objects
Generate a head generator
Convert a sequence of fields into a generator
Generate a subseq
Write consensus results
Write sequences to a fasta file
Compute md5sum of a sequence
Unpack generator
Permute generator
Write a sequence of sequences
Print seqsum summary

Get all kandi verified functions for this library.

smof Key Features

No Key Features are available at this moment for smof.

smof Examples and Code Snippets

No Code Snippets are available at this moment for smof.

Community Discussions

Trending Discussions on smof

AutoLisp 2021 processing regex differently to 2019

QUESTION

AutoLisp 2021 processing regex differently to 2019

Asked 2020-May-27 at 16:44

We have a function, called via the input paste reactor to process some text in a drawing. We are getting different results using Autodesk 2021 from a script migrated from 2019 and I can't figure out why there is a difference. The script is below:

...

ANSWER

Answered 2020-May-27 at 16:44

This is caused by the new AutoLISP Unicode character support introduced in AutoCAD 2021, alongside the introduction of VS Code as the primary AutoLISP Editor.

To revert to behaviour exhibited by AutoCAD 2020 and earlier, you can set the new LISPSYS system variable to 0:

LISPSYS (System Variable)
Controls the default AutoLISP development environment and the editor launched with the VLISP command.
0
Visual LISP IDE (VLIDE) is set as the default editor, however AutoLISP functions don't fully support Unicode characters. AutoLISP source (LSP) files when saved and compiled use the ASCII (MBCS) character set. Note: This setting results in the behavior of AutoCAD 2020 and earlier releases, and is supported on Windows only.
1
Visual Studio (VS) Code is set as the default editor and AutoLISP functions fully support Unicode characters. AutoLISP source (LSP) files, when saved, use the encoding set in VS Code, and when compiled, they use the Unicode character set.
2
Visual Studio (VS) Code is set as the default editor and AutoLISP functions fully support Unicode characters. AutoLISP source (LSP) files, when saved, use the encoding set in VS Code, and when compiled they use the ASCII (MBCS) character set.

Source https://stackoverflow.com/questions/62013309

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install smof

You can install using 'pip install smof' or download it from GitHub, PyPI.
You can use smof like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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