debruijnator | A very simple de Bruijn graph analyzer

by ryneches Python Version: Current License: No License

X-Ray Key Features Code Snippets Community Discussions Vulnerabilities Install Support

kandi X-RAY | debruijnator Summary

debruijnator is a Python library. debruijnator has no bugs, it has no vulnerabilities, it has build file available and it has low support. You can download it from GitHub.

A very simple de Bruijn graph analyzer.

Support

Quality

Security

License

Reuse

Support

debruijnator has a low active ecosystem.

It has 9 star(s) with 1 fork(s). There are 3 watchers for this library.

It had no major release in the last 6 months.

debruijnator has no issues reported. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of debruijnator is current.

Quality

debruijnator has no bugs reported.

Security

debruijnator has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

debruijnator does not have a standard license declared.

Check the repository for any license declaration and review the terms closely.

Without a license, all rights are reserved, and you cannot use the library in your applications.

Reuse

debruijnator releases are not available. You will need to build from source code and install.

Build file is available. You can build the component from source.

Top functions reviewed by kandi - BETA

kandi has reviewed debruijnator and discovered the below as its top functions. This is intended to give you an instant insight into debruijnator implemented functionality, and help decide if they suit your requirements.

Adds an edge to the graph .
Get kmers for a sequence .
Consume a sequence of k - mers
parse a fasta file
Initialize the model .
convert sequence to lowercase

Get all kandi verified functions for this library.

debruijnator Key Features

No Key Features are available at this moment for debruijnator.

debruijnator Examples and Code Snippets

No Code Snippets are available at this moment for debruijnator.

Community Discussions

No Community Discussions are available at this moment for debruijnator.Refer to stack overflow page for discussions.

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install debruijnator

You can download it from GitHub.
You can use debruijnator like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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