CATMAID-to-Blender | CATMAID Server and Pull Data | Addon library
kandi X-RAY | CATMAID-to-Blender Summary
kandi X-RAY | CATMAID-to-Blender Summary
Plugin for [Blender] "Blender Homepage") to interface with [CATMAID] "CATMAID Repo") servers, request and analyze data. Tested with Blender 2.79 and CATMAID 2020.02.15.
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Top functions reviewed by kandi - BETA
- Implementation of the CATMAID export method
- Function to create bar plot
- Show the message
- Generate a list of random colors
- Execute CATMAIDImport
- Show a message
- Calculate the similarity score between two nodes
- Calculates the similarity matching between two neurons
- Gets the list of available volumes
- Determine the annotation of the given neurons
- Retrieve remote objects
- Function to export objects
- Execute globus search
- Loads all the connected neurons
- Export connector data
- Loads a set of neurons to load
- Create a neuron hull
- Check if the neuron is in the given volume
- Extract selected neurons
- Cancels the simulation
- Initialize the layer
- Searches for the names of the names
- Compute synapse synapse
- Renders the dialog
- Execute the connector
- Select objects based on pickling
CATMAID-to-Blender Key Features
CATMAID-to-Blender Examples and Code Snippets
Community Discussions
Trending Discussions on Addon
QUESTION
I have microk8s v1.22.2 running on Ubuntu 20.04.3 LTS.
Output from /etc/hosts:
ANSWER
Answered 2021-Oct-10 at 18:29error: unable to recognize "ingress.yaml": no matches for kind "Ingress" in version "extensions/v1beta1"
QUESTION
Problem
While using Storybook, I am running npm run storybook and getting the error below.
ANSWER
Answered 2021-Jul-29 at 17:17Solution
After taking a step back, I realized that I could try out what I did to fix the sass-loader issue: downgrading major versions.
Steps
- Downgraded
style-loader1 major version to2.0.0:npm i style-loader@2.0.0 - Then, as luck would have it, I ran into the same issue with
css-loader - Downgraded
css-loader1 major version to5.2.7:npm i css-loader@5.2.7
Summary
By downgrading all of the loaders one major version, I was able to get it to work.
QUESTION
I am migrating a library to use Angular and Material 12 (currently in version 10), and Storybook is used to expose the various components of this library. To do so, I upgraded Angular and Material to version 12 with the Angular Update Guide, Storybook to version 6.3 with npx sb upgrade and I followed the steps described here to fully migrate Storybook and use webpack5.
Unfortunately, the base.scss file previously included globally in the rendering of stories is no longer included (stories are now without any CSS). This base.scss file is included in a Typescript file with:
import '!style-loader!css-loader!sass-loader!./base.scss';
With Storybook 6.3 and Angular 10, everything works perfectly.
To fix that, I tried to add this configuration in main.js, as it is described in the documentation:
...ANSWER
Answered 2021-Oct-15 at 14:38I have answered my question. In fact there was no need to change the webpack configuration for my case. It was enough to add the @storybook/preset-scss addon.
The problem was described here. I needed to downgrade Angular to 12.1 version. I was in 12.2.
Hopefully this helps someone.
QUESTION
ANSWER
Answered 2022-Feb-08 at 19:42Found the answer here -> https://github.com/storybookjs/storybook/issues/15336
The solution is simply to add the following to .storybook\main.js
QUESTION
I have pretrained model for object detection (Google Colab + TensorFlow) inside Google Colab and I run it two-three times per week for new images I have and everything was fine for the last year till this week. Now when I try to run model I have this message:
...ANSWER
Answered 2022-Feb-07 at 09:19It happened the same to me last friday. I think it has something to do with Cuda instalation in Google Colab but I don't know exactly the reason
QUESTION
Im trying to make an ingress for the minikube dashboard using the embedded dashboard internal service.
I enabled both ingress and dashboard minikube addons.
I also wrote this ingress YAML file :
...ANSWER
Answered 2021-Dec-13 at 11:10I had similar issues with Minikube's Ingress, but I was using Windows.
After indepth search, I discovered that the problem came from Docker's driver.
I changed the driver to VirtualBox and Ingress started behaving as expected.
This entry provides further details.
QUESTION
When I run npm ci on Github Actions I got the error:
ANSWER
Answered 2021-Sep-20 at 20:57Solved removing packages-lock.json and running again using NodeJS 14 (was 10)
QUESTION
#include
int& addOne(int& x)
{
x += 1;
return x;
}
int main()
{
int x {5};
addOne(x) = x;
std::cout << x << ' ' << addOne(x);
}
ANSWER
Answered 2022-Feb-02 at 00:42Since C++17 the order of evaluation is specified such that the operands of = are evaluated right-to-left and those of << are evaluated left-to-right, matching the associativity of these operators. (But this doesn't apply to all operators, e.g. + and other arithmetic operators.)
So in
QUESTION
I'm currently making a 2D game in Javascript, but I want to the game to have different lighting levels, for example, if I were to create a day and night cycle. However, I want to be able to cut holes in the lighting/foreground, or do something so that I can make certain parts of the screen lit up, for example like a flashlight or candle. Note: I'm also using the P5.js library.
The most obvious idea that came to mind for going about in creating a foreground is just creating a rectangle with some opacity that covers the entire screen. This is good, but how am I supposed cut through this? Obviously, the code below won't work because I'm just layering on another element, and the rectangle is still obstructed and not perfectly clear.
...ANSWER
Answered 2022-Jan-22 at 03:11The erase() function may be what you are looking for. It is more flexible than trying to explicitly paint over the areas you want to cover (such as in the approach of using the stroke of a circle and rectangle to cover everything except a circle). And it is easier to use than beginContour() since you can use it with any of the built in drawing primitives (rect, ellipse, triangle, etc).
QUESTION
I am writing a C++ addon for Nodejs which uses OpenSSL 3 and I keep getting this error when trying to compile the code with the command node-gyp build:
/Users/myuser/Library/Caches/node-gyp/17.0.1/include/node/openssl/macros.h:155:4: error: "OPENSSL_API_COMPAT expresses an impossible API compatibility level"
I can see that the OpenSSL used here is included from the NodeJS folder, is there any way to link the OpenSSL library I installed with homebrew on my mac M1?
My binding.gyp file looks like this:
...ANSWER
Answered 2022-Jan-09 at 23:32This is a problem in Node.js: https://github.com/nodejs/node/issues/40575
And here is a workaround: https://github.com/mmomtchev/node-gdal-async/commit/85816cbeff104b5484aae840fe43661c16cb6032
Add those two defines to your gyp:
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install CATMAID-to-Blender
Functions (e.g. Retrieving skeletons/connectors) that need you to be logged into your CATMAID server will be grayed-out until you did so by hitting Connect 2 CATMAID
Skeletons can be retrieved by their skeleton ID, by annotations or based on connectivity (Retrieve Partners)
Important side node: in order to identify cell bodies, the script searches for nodes with a radius > 10
Once imported, skeleton/connector data can be readily exported to vector graphics (SVG) with a broad range of options (e.g. coloring, filters, scaling). Look at lower left panel when exporting for these options.
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