indra | Integrated Network and Dynamical Reasoning Assembler | Genomics library
kandi X-RAY | indra Summary
kandi X-RAY | indra Summary
INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system, originally developed for molecular systems biology and then generalized to other domains (see INDRA World). INDRA draws on natural language processing systems and structured databases to collect mechanistic and causal assertions, represents them in a standardized form (INDRA Statements), and assembles them into various modeling formalisms including causal graphs and dynamical models. At the core of INDRA are its knowledge-level assembly procedures, allowing sources to be assembled into coherent models, a process that involves correcting systematic input errors, finding and resolving redundancies, inferring missing information, filtering to a relevant scope and assessing the reliability of causal information. The detailed INDRA documentation is available at
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Top functions reviewed by kandi - BETA
- Yield MonomerPattern objects for the given agent
- Parse identifiers URL
- Determine the namespace and db id from the given identifiers
- Return the namespace corresponding to the given identifiers
- Assemble a model
- Apply a patch to the original text
- Add INDRA Statements
- Create an INDRA model from INDRA Statements
- Symbols assemble
- Update NCIT map
- Create an INDRA statement from the given mention and mention
- Create an INDRA model from a Statements
- Return the upload content of a PMID
- Filter statements by db_refs
- Assemble from from_to_to_to_to_to_to
- Process a single statement
- Map grounding to grounding
- Filter a list of statements in a gene list
- Filter out statements that are not in the given list
- Update the mappings
- Generate a sample of paths
- Assemble the phosphorylation
- Read the hgnc entry map from a TSV file
- Update the reference table
- Assemble a multi - way Complex
- Read and annotate text files
indra Key Features
indra Examples and Code Snippets
Lines of Code : 10License : Strong Copyleft (CC BY-SA 4.0)
Copyinp = '''Security Name % to Net Assets* DEBENtURES 0.04 Britannia Industries Ltd. EQUity & RELAtED 96.83 HDFC Bank 6.98 ICICI 4.82 Infosys 4.37 Reliance 4.05 Bajaj Finance 3.82 Housing Developme
nt Corpn. 3.23 Grindwell Norton 3.22 SRFdriver.get("http://stockcare.net/ISINNumber.asp")
WebDriverWait(driver, 20).until(EC.frame_to_be_available_and_switch_to_it((By.CSS_SELECTOR,"form[name='frmScrip'] iframe")))
print(WebDriverWait(driver, 20).until(EC.visibility_of_element_lfor item in json_data[0]["emp_details"]:
if item[0] in ['Shubham']:
import json
with open('smpl.json', 'r') as file:
json_data = json.load(file)
for item in json_data[0]["emp_details"]import re
x =["Mr Bond, 67, is an engineer in the UK"
,"Amanda B. Bynes, 34, is an actress"
,"Peter Parker (45) will be our next administrator"
,"Mr. Dylan is 46 years old."
,"Steve Jones, Age:32,"]
[re.findall(r'\d{1,3}', i)[0] for i id = [{'id': '1', 'nama': 'fajar'}, {'id': '2', 'nama': 'fajar'}, {'id': '3', 'nama': 'fajar'}, {'id': '4', 'nama': 'fajar'}, {'id': '5', 'nama': 'sita'}, {'id': '6', 'nama': 'lia'}, {'id': '7', 'nama': 'indra'}, {'id': '8', 'nama': 'indra'Community Discussions
Trending Discussions on indra
QUESTION
smpl.json file:
...ANSWER
Answered 2020-Feb-06 at 07:12There are 2 problems with your code.
First, the JSON contains an array as the root. Therefore you need to get emp_details property of the first item:
QUESTION
*sorry for my bad eng :( Guyss... Please help me,... i just learn MySQL, and i dont get why "permasalahan_khusus" doesnt match with "nama_psikolog" :(
please explain where did i go wrong
...ANSWER
Answered 2019-Dec-23 at 05:27Use JOIN like this (coba pakai JOIN seperti ini):
QUESTION
I'm testing a login request but jest is not calling the mock:
This is mys test :
...ANSWER
Answered 2019-Sep-26 at 22:03I don't see you flushing the promises. Can you try using the flush promise library?
QUESTION
I need to divide my dataset into different subsets based on the data types.
In Pandas we can do it by df.select_dtypes, I want to implement this in Spark Scala. Can anyone please help.
For example, below is my dataset: Dataset
I want to divide the dataset based on the datatypes into Float and String.
My final output should be something like this, with two different dataframes with similar data types in them. Subset of Dataframe with only floating values
Subset of Dataframe with only String values
****Note: 1) We already have a Pandas package in PySpark, but I want to implement in Spark Scala. 2) If you can also help in how to seperate the columns with different DATE datatype will be really helpful****
Any help is appreciated, Thanks
Below is my code, where I'm trying to divide String, Numbers and dates into different dataframes based on their datatypes:
...ANSWER
Answered 2019-Sep-25 at 13:48import org.apache.spark.sql.functions._
val fieldsByDataType: Map[DataType, Array[Column]] = ds.schema.fields.groupBy(filed => filed.dataType)
.mapValues(fields => fields.map(field => col(field.name)))
for ((dataType, columns) <- fieldsByDataType) {
println(s"Dataset for $dataType")
ds.select(columns:_*).show()
}
QUESTION
I have created a very simple JSON API. it has 3 properties, I can access and consume their values because I created it and I know what its properties are. But in case I'm using an API that I don't know what properties it has, and I wanted to, let's say, console log them ¿How can I iterate over API keys?
this is my API:
...ANSWER
Answered 2019-Sep-18 at 04:09QUESTION
I am trying to build an app which would contain 4 buttons and each one of them would lead to a new screen, But whenever I try to click any button it shows undefined is not an object (evaluating '_this2.props.navigation.navigate')
onPress Buttons.js:21:57. When I click the flood button it should navigate to flood page where it shows only text flood. I am new to react native any want to write clean and modular code. What should be a great directory structure?
Directory Structure - https://imgur.com/a/xSb9QqT Error - https://imgur.com/a/8u0pdKb
APP.js
ANSWER
Answered 2019-May-04 at 21:05Indra is not part of your navigation, add it to your navigation routes.
QUESTION
What could be the issue getting this error ? I am trying to access protected field from extended class using static method.
...ANSWER
Answered 2019-Mar-26 at 12:43Because getReter() is a static method.
It means that it's accessed by the class constructor (i.e TESTING.getReter()) and not by the instance, hence - is not aware of this, which is the reference to the instance of the class and not the class constructor itself.
remove the static notation and you'll have access.
For more information follow this post: https://www.typescriptlang.org/docs/handbook/classes.html#static-properties
QUESTION
I have array of object in data attribute and I want to get that value as array of object in js. I confused how to parse string to array in js. Here is my data attribute:
...ANSWER
Answered 2019-Jan-28 at 10:04It is because of invalid JSON format, the keys should be enclosed with double quotes.
QUESTION
I have to implement comment and reply system in my application. I am getting the data from the API and I don't understand how to do this cause I have not done anything like this before. I know I have to take two different cells for this type of system but I don't Know how to filter the data for comments and replies and show them in their respective cells.
Here is how my JSON:
...ANSWER
Answered 2018-May-13 at 07:09The best practice of API response should be like, reply should be in the comments dictionary. Like:
QUESTION
Newb here.
I downloaded this indicator to extract OHLC from MT4 client terminal.
It seemed fine at first, but:
1. It saves data with 2 decimal places only;
2. It doesn't save the OHLC for all instruments.
Can someone give me a hand with the right set of code?
I am attaching the code that I downloaded from the net and the results that drive me nuts.
...ANSWER
Answered 2018-Sep-08 at 22:09CustomIndicator is bad
The CustomIndicator-type of MQL4 code will hang-&-wait until a QUOTE message arrives from the Broker-side ( waiting thus for a first FxEvent to appear ... and it may never arrive ... so some other MQL4-code type would serve better ... )
You ask others to help you, but it seems you have not at least tried to read your code, have you?
You explicitly trimmed values to no more than 2 decimal places:
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