ipanda | insilico Pathway Activation Network Decomposition Analysis | Genomics library

by varnivey Python Version: Current License: Non-SPDX

X-Ray Key Features Code Snippets Community Discussions(2)Vulnerabilities Install Support

kandi X-RAY | ipanda Summary

ipanda is a Python library typically used in Healthcare, Pharma, Life Sciences, Artificial Intelligence, Genomics applications. ipanda has no bugs, it has no vulnerabilities and it has low support. However ipanda build file is not available and it has a Non-SPDX License. You can download it from GitHub.

in silico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis method that aids interpretation of large-scale gene expression data. The method introduced here includes coexpression analysis and gene importance estimation to robustly identify relevant pathways and biomarkers for patient stratification, drug discovery and other applications.

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Support

ipanda has a low active ecosystem.

It has 17 star(s) with 11 fork(s). There are 3 watchers for this library.

It had no major release in the last 6 months.

There are 5 open issues and 0 have been closed. On average issues are closed in 1007 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of ipanda is current.

Quality

ipanda has 0 bugs and 0 code smells.

Security

ipanda has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

ipanda code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

ipanda has a Non-SPDX License.

Non-SPDX licenses can be open source with a non SPDX compliant license, or non open source licenses, and you need to review them closely before use.

Reuse

ipanda releases are not available. You will need to build from source code and install.

ipanda has no build file. You will be need to create the build yourself to build the component from source.

It has 399 lines of code, 24 functions and 4 files.

It has high code complexity. Code complexity directly impacts maintainability of the code.

Top functions reviewed by kandi - BETA

kandi has reviewed ipanda and discovered the below as its top functions. This is intended to give you an instant insight into ipanda implemented functionality, and help decide if they suit your requirements.

Load text from a text file
Generate lines
Extract ARs from the given gene_dict
Extract AR values from text files

Get all kandi verified functions for this library.

ipanda Key Features

No Key Features are available at this moment for ipanda.

ipanda Examples and Code Snippets

No Code Snippets are available at this moment for ipanda.

Community Discussions

Trending Discussions on ipanda

Can't install pandas for Python34 in EC2

Error in installing pandas using pip on python 3.4, ubuntu 15.10

QUESTION

Can't install pandas for Python34 in EC2

Asked 2017-Nov-07 at 21:00

I am trying to install pandas in an EC2 instance using the AWS linux distro for use with Python34.

I ran:

...

ANSWER

Answered 2017-Nov-07 at 21:00

I'm guessing you have an old version of pip, otherwise it would try to install via a wheel (binary dist). So one option would be to upgrade pip, then install pandas. (python34 -m pip install -U pip)
If you do want to build pandas from source, or any python c-extension, you need to install the python development headers, probably something like yum install python34-python-devel.x86_64

Source https://stackoverflow.com/questions/47165964

QUESTION

Error in installing pandas using pip on python 3.4, ubuntu 15.10

Asked 2017-Jan-30 at 08:26

Trying to install pandas with pip (python3.4) on ubuntu 15.10, I am getting this error. The numpy version is 1.12 (latest). I have installed pandas on ubuntu and windows but never faced this kind of problem.

...

ANSWER

Answered 2017-Jan-30 at 08:26

You always need the python-dev package to compile Python C extensions such as the ones in Pandas. When you install Python from source, they're installed along, but not with the Ubuntu package.

From pip install --help:

Source https://stackoverflow.com/questions/41929889

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install ipanda

You can download it from GitHub.
You can use ipanda like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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