scran | Clone of the Bioconductor repository for the scran package | Genomics library

by MarioniLab R Version: Current License: No License

X-Ray Key Features Code Snippets Community Discussions(1)Vulnerabilities Install Support

kandi X-RAY | scran Summary

scran is a R library typically used in Artificial Intelligence, Genomics applications. scran has no bugs, it has no vulnerabilities and it has low support. You can download it from GitHub.

Clone of the Bioconductor repository for the scran package.

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Quality

Security

License

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Support

scran has a low active ecosystem.

It has 32 star(s) with 18 fork(s). There are 7 watchers for this library.

It had no major release in the last 6 months.

There are 6 open issues and 72 have been closed. On average issues are closed in 14 days. There are 1 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of scran is current.

Quality

scran has 0 bugs and 0 code smells.

Security

scran has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

scran code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

scran does not have a standard license declared.

Check the repository for any license declaration and review the terms closely.

Without a license, all rights are reserved, and you cannot use the library in your applications.

Reuse

scran releases are not available. You will need to build from source code and install.

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scran Key Features

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scran Examples and Code Snippets

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Community Discussions

Trending Discussions on scran

Error installing R package: scran using Anaconda

QUESTION

Error installing R package: scran using Anaconda

Asked 2020-Apr-06 at 15:18

I am using anaconda to download an R package called scran. Although I have download it to my R library path, I received error. When I try to load my package in my R environment, it also failed. I am on macOS Catalina (10.15.4). I also try BiocManager::install(scran), but also failed.

scran (https://bioconductor.org/packages/release/bioc/html/scran.html)

Can someone give me a hand? Really appreciated! Please see the details below.

# I download scran using conda install -c Bioconda bioconductor-scran

...

ANSWER

Answered 2020-Apr-06 at 15:18

I had your exact second error you are experiencing today, and think I have found a fix.

After doing some digging, I found my problem was with openblas not SCRAN. My fix was:

Source https://stackoverflow.com/questions/61056386

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install scran

You can download it from GitHub.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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