sesame | 🍪 SEnsible Step-wise Analysis of DNA MEthylation BeadChips | Genomics library

 by   zwdzwd R Version: v1.1.15 License: MIT

kandi X-RAY | sesame Summary

kandi X-RAY | sesame Summary

sesame is a R library typically used in Artificial Intelligence, Genomics applications. sesame has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. You can download it from GitHub.

Please cite and reference SeSAMe: reducing artifactual detection of DNA methylation by Infinium BeadChips in genomic deletions for more details.
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            kandi-support Support

              sesame has a low active ecosystem.
              It has 31 star(s) with 22 fork(s). There are 5 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 41 open issues and 31 have been closed. On average issues are closed in 78 days. There are 1 open pull requests and 0 closed requests.
              It has a neutral sentiment in the developer community.
              The latest version of sesame is v1.1.15

            kandi-Quality Quality

              sesame has no bugs reported.

            kandi-Security Security

              sesame has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              sesame is licensed under the MIT License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              sesame releases are not available. You will need to build from source code and install.
              Installation instructions are not available. Examples and code snippets are available.

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            sesame Key Features

            No Key Features are available at this moment for sesame.

            sesame Examples and Code Snippets

            No Code Snippets are available at this moment for sesame.

            Community Discussions

            QUESTION

            Find duplicates based on specific key/value only
            Asked 2021-Jun-10 at 05:56

            I'm trying to tag objects that are duplicates in a JSON using Python, based only on the key/values for "price" and "full address" and ignoring "url". A new "duplicate" key is then created, with a 1 or a 2 value for each duplicate. How is can this be best done? Current:

            ...

            ANSWER

            Answered 2021-Jun-10 at 05:05

            Keep a running tally of duplicates and do a second pass to delete the key for any non-duplicate:

            Source https://stackoverflow.com/questions/67914914

            QUESTION

            Targeting the correct HTML with htmlunit
            Asked 2021-Apr-30 at 19:35

            Overview

            I am working on a project to web scrape a local theater's site for films that are now playing. My goal is to eventually embed this information (film title, film description, etc.) into an email via JSON that is sent every morning letting us know what is playing without actually having to visit their site or download their application.

            Base URL for this project: https://www.landmarktheatres.com/albany-ny/spectrum-8-theatres

            Problem

            Using htmlunit I have been successful in extracting the film titles from the base url. However, included in these titles are the upcoming films which are also provided in the base url HTML.

            I need help in targeting the correct HTML. My current code utilizes an HtmlElement list:

            ...

            ANSWER

            Answered 2021-Apr-30 at 19:35

            The consistent difference between existing and non-released films is the attribute data-film-session and data-film-exp. Only add to the list if the entry has one or both of these attributes. This is untested, it may not work, but it's a step in the right direction.

            Source https://stackoverflow.com/questions/67339318

            QUESTION

            An unhandled exception occurred: Cannot find module 'source-map' when running angular on raspberry pi
            Asked 2021-Apr-29 at 07:39

            I am currently working on a Angular application which I plan on running on a Raspberry Pi. But, when trying to start the application, the following error occurs:

            ...

            ANSWER

            Answered 2021-Apr-29 at 07:39

            Have you already tried deleting the node_modules directory and running npm install afterwards?

            Source https://stackoverflow.com/questions/67284262

            QUESTION

            How to create a nested array based on a plain object
            Asked 2021-Apr-28 at 12:38

            I have an endpoint that outputs data in the following format:

            ...

            ANSWER

            Answered 2021-Apr-28 at 12:37

            You could take a simple single loop approach without recursion, but with an object for keeping all nodes.

            Source https://stackoverflow.com/questions/67300219

            QUESTION

            R extract house / street numers from adress string
            Asked 2021-Mar-15 at 11:46

            say I have the following data with addresses, i.e. street names. My goal is to separate street names from house numbers.

            ...

            ANSWER

            Answered 2021-Mar-15 at 10:23

            QUESTION

            includes() not returning true for substring
            Asked 2021-Mar-08 at 20:04

            I'm having trouble figuring out why this function isn't returning results if the keyword is a substring.

            ...

            ANSWER

            Answered 2021-Mar-08 at 19:55

            You can use Array#some to check if any of the strings in the array includes the keyword.

            Source https://stackoverflow.com/questions/66536188

            QUESTION

            Push objects into an array programatically
            Asked 2021-Mar-04 at 13:49

            I am Building a simple recipes app and I am fetching the recipes from an API.

            I am having a little bit of trouble with the ingredients and their measures.

            This is what I am getting from the API:

            (You can use postman or something similar to see the data from this link https://www.themealdb.com/api/json/v1/1/lookup.php?i=52773)

            ...

            ANSWER

            Answered 2021-Mar-04 at 13:21

            First I think the api should be fixed otherwise I see that there are only 20 ingredients allowed and they are matched with indexes; you can do something like this

            Source https://stackoverflow.com/questions/66475798

            QUESTION

            Calculating and plotting standard errors using a dataset in long format
            Asked 2021-Jan-29 at 17:39

            I am making a plot for likeability of different ice cream flavours by school. I already have the code for making the plot, but I'm stuck on calculating and adding the error bars to the plot. I know summarise and geom_errorbar works, but I'm not sure how to calculate standard error with a long data format.

            Here's reproducible code:

            ...

            ANSWER

            Answered 2021-Jan-29 at 17:39

            One possible solution could be using a new data.frame generated with summarise

            Source https://stackoverflow.com/questions/65959117

            QUESTION

            Error message of missing values while plotting facet_grid bar plot
            Asked 2021-Jan-29 at 17:05

            I'm making a facet grid bar plot using ggplot2. I keep getting the error message "Removed 15 rows containing missing values (geom_bar)" when there's no missing values in my dataset.

            Here's a reproducible example where I'm plotting the likeability of ice cream flavours by schools:

            ...

            ANSWER

            Answered 2021-Jan-29 at 17:05

            The bars start at zero, and so using scale_y_continuous(limits=c(1,5)) trims all the bars as they exceed the plot window. You can fix this by setting the lower limit to 0.

            Alternatively, you can replace scale_y_continuous() (which trims the data to only that in the plot data) with coord_cartesian(ylim=c(1,5)) which plots data that would go outside the plot window.

            The help file for ?coord_cartesian explains a bit about the two different methods of setting the axes, which can make a big difference when plotting summaries of the data, or fitting smoothers.

            Source https://stackoverflow.com/questions/65958625

            QUESTION

            Unable to connect to Firestore via iOS Simulator on Apple Silicon
            Asked 2021-Jan-21 at 23:55

            I'm trying to access my Firestore instance using my M1 MacBook Air, with no luck. Trying to access via the iOS simulator gives the following response:

            ...

            ANSWER

            Answered 2021-Jan-21 at 15:44

            Answering my own question for any who may come across this - I "solved" this issue. I had to use my own iPhone and deploy the code to that device, where it ran fine. I suppose this is an iOS simulator bug, specifically on Apple Silicon right now.

            Source https://stackoverflow.com/questions/65811437

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install sesame

            You can download it from GitHub.

            Support

            Bug reports are appreciated. Register issues at the SeSAMe issue tracker.
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            https://github.com/zwdzwd/sesame.git

          • CLI

            gh repo clone zwdzwd/sesame

          • sshUrl

            git@github.com:zwdzwd/sesame.git

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