noodles | Bioinformatics I/O libraries in Rust | Genomics library

 by   zaeleus Rust Version: noodles-util-0.13.0 License: MIT

kandi X-RAY | noodles Summary

kandi X-RAY | noodles Summary

noodles is a Rust library typically used in Artificial Intelligence, Genomics applications. noodles has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. You can download it from GitHub.

noodles is a library for handling various bioinformatics file formats. It currently includes readers and writers for BAM 1.6, BCF 2.2, BGZF, CRAM 3.0, CSI, FASTA, FASTQ, GFF3, SAM 1.6, tabix, and VCF 4.3. Notably, the BAM and CRAM parsers are pure Rust implementations.
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            kandi-support Support

              noodles has a low active ecosystem.
              It has 316 star(s) with 42 fork(s). There are 17 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 7 open issues and 124 have been closed. On average issues are closed in 34 days. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of noodles is noodles-util-0.13.0

            kandi-Quality Quality

              noodles has 0 bugs and 0 code smells.

            kandi-Security Security

              noodles has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              noodles code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              noodles is licensed under the MIT License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              noodles releases are not available. You will need to build from source code and install.
              Installation instructions are not available. Examples and code snippets are available.

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            noodles Key Features

            No Key Features are available at this moment for noodles.

            noodles Examples and Code Snippets

            No Code Snippets are available at this moment for noodles.

            Community Discussions

            QUESTION

            Ruby creating file in home directory instead of current one
            Asked 2022-Mar-31 at 11:07

            I'm running my program in a directory with the following path:

            /home/user/Desktop/Ruby/Projects/event_manager/lib,

            trying to accomplish the following:

            ...

            ANSWER

            Answered 2022-Mar-31 at 11:07

            You should get the current directory path and concat with filename.

            Try this code, it should solve the problem.

            Source https://stackoverflow.com/questions/71690387

            QUESTION

            The code works. But besides that, there is an error. Why and how to fix it?
            Asked 2022-Feb-06 at 01:39

            The code works. But besides that, there is an error. Why and how to fix it?

            ...

            ANSWER

            Answered 2022-Feb-06 at 01:39

            You must change the line ingredients = yield to ingredients = yield if block_given?. This is because you invoke the method without passing a block. The method cannot yield if no block given.

            Source https://stackoverflow.com/questions/71003535

            QUESTION

            Point-of-Sales in C Language
            Asked 2022-Jan-25 at 11:20

            I am very new here so I still don't know how this site works but anyways, I need help!

            I'm a total beginner in c programming (actually in programming) and I'm making a simple point-of-sales program. Here's the code I've made so far...

            ...

            ANSWER

            Answered 2022-Jan-25 at 11:20

            Add total=0 after system("cls");

            Source https://stackoverflow.com/questions/70847389

            QUESTION

            How to iterate over an array of hashes in Ruby and return all of the values of a specific key in a string
            Asked 2021-Dec-15 at 04:32

            I'm currently trying to iterate over an array of hashes, and return all of the values of the "name" key in a string. Here's the array:

            ...

            ANSWER

            Answered 2021-Dec-15 at 04:32

            You can use Enumerable#map for this:

            Source https://stackoverflow.com/questions/70358446

            QUESTION

            Responsive image gallery with CSS grid: How can I stretch one img to be bigger than it actually is?
            Asked 2021-Nov-29 at 07:00

            I'm making a responsive photo gallery using CSS grid. Everything is mostly fine until you stretch the browser width to above 1240px. One image should take up the space of four images but as the browser gets really big the image doesn't take up all the space that I want it to. I think it's because the original size of the image is 800x600. Any help would be greatly appreciated. I'm doing the project on CodePen if you would like to see it: https://codepen.io/Zakkku/pen/JjrPPGo

            ...

            ANSWER

            Answered 2021-Nov-29 at 03:24

            QUESTION

            flutter inkwell onTap
            Asked 2021-Nov-21 at 12:46

            so i have this page called screen1 its work fine and show the data

            ...

            ANSWER

            Answered 2021-Nov-21 at 12:29

            The ListTile widgets themselves have an onTap event and do not require InkWell

            Source https://stackoverflow.com/questions/70054474

            QUESTION

            how to find both string and string array in mongodb
            Asked 2021-Nov-08 at 04:12

            I'm a beginner at MongoDB.

            I want to find documents in MongoDB by favorite.foods.

            Here are documents

            ...

            ANSWER

            Answered 2021-Nov-08 at 04:08

            QUESTION

            Why is my getter/setter methods not working as intended - suspect it is something to do with 'this'
            Asked 2021-Oct-29 at 23:26

            if someone could explain why the getter method in this code is returning undefined, that would be appreciated. I figured it might be something to do with the 'this' context. Is the this.appetizers returning undefined because of the this context? When I call a method on the object and then that method calls the get method it fails, is this because the this context changes to the function object? I thought this could be the case but I have another code example that does this and it works fine.

            ...

            ANSWER

            Answered 2021-Oct-29 at 23:26

            As mentioned in the comments, it's undefined. This is because even though you have a getter, it still sits under the _courses object:

            Source https://stackoverflow.com/questions/69775591

            QUESTION

            Overloading Functions with Pattern Matching?
            Asked 2021-Oct-27 at 23:30

            Hello fellow Haskell Fans!

            All my questions are about the -- OVERLOADED(?) FUNCTION -- part, I included the rest for completeness.

            1. I was wondering if it makes sense to use Pattern Matching to Overload my function order like I did in my example below.

            2. I was also wondering if the first function with the function call "checkBalance balance" in the first version of the order function always gets executerd (because I didn't sepcify a pattern for it) or never (because all the patterns of Food are covered in the functions below).

            Thanks in advance from a beginner :)

            ...

            ANSWER

            Answered 2021-Oct-27 at 23:16

            I can't see anything really wrong with that function definition.

            Function clauses are tried in order, so that first branch with checkBalance will always be tried first, and the next guard, and so on, and if none of the guards of the first group is matched, then the next group will be tried (O Indian {} _ _).

            If the guards of the first group were exhaustive, then the other branches below would not be reachable, which would mean something is wrong but it's hard to say more without more details.

            Source https://stackoverflow.com/questions/69746450

            QUESTION

            flutter: GridView not showing properly
            Asked 2021-Oct-27 at 14:38

            i'm trying to create a restaurant menu app in flutter language, and i wanted to view my saved data inside json file as gridView but sadly i'm getting error while running the app.. However, i tried to change the gridView to listView and its showing good.. so is there a way to show them as gridView? thanks in advance

            ...

            ANSWER

            Answered 2021-Oct-27 at 14:38

            Firstly I would prefer having data from Future instead of and will avoid forEach method to handle complex and bigger computation.

            Lets processed with current condition of code-structure. According to your question, main issue is using ListView/GridView.

            While SingleChildScrollView is handling the scroll, use GridView.count or ListView

            Source https://stackoverflow.com/questions/69739336

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install noodles

            You can download it from GitHub.
            Rust is installed and managed by the rustup tool. Rust has a 6-week rapid release process and supports a great number of platforms, so there are many builds of Rust available at any time. Please refer rust-lang.org for more information.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            CLONE
          • HTTPS

            https://github.com/zaeleus/noodles.git

          • CLI

            gh repo clone zaeleus/noodles

          • sshUrl

            git@github.com:zaeleus/noodles.git

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