nexus | Blue Brain Nexus - A knowledge graph for data-driven science | Graph Database library
kandi X-RAY | nexus Summary
kandi X-RAY | nexus Summary
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QUESTION
I'm trying to apply some SQL optimization for GraphQL queries containing relations. I use Prisma (v. 2.24.1), Nexus (v. 1.0.0), nexus-plugin-prisma (v. 0.35.0) and graphql (v. 15.5.0).
schema.prisma:
...ANSWER
Answered 2021-Jun-15 at 05:04There's a community made plugin that you can use that handles all the heay lifting: https://paljs.com/plugins/select/
QUESTION
I have a container with IBM MQ (Docker image ibmcom/mq/9.2.2.0-r1
) exposing two ports (9443 - admin, 1414 - application).
All required setup in OpenShift is done (Pod, Service, Routes).
There are two routes, one for each port.
pointing to the ports accordingly (external ports are default http=80, https=443).
Admin console is accessible through the first route, hence, MQ is up and running.
I tried to connect as a client (JMS 2.0, com.ibm.mq.allclient:9.2.2.0
) using standard approach:
ANSWER
Answered 2021-Jun-12 at 11:32I'm not sure to fully understand your setup, but"Routes"
only route HTTP traffic (On ports 80 or 443 onyl), not TCP traffic.
If you want to access your MQ server from outside the cluster, there are a few solutions, one is to create a service of type: "NodePort"
Your Service is not a NodePort Service. In your case, it should be something like
QUESTION
We have developed a common functions packaged as a jar and available at the Nexus .
Different teams are downloading our jar and using our common functions in their project .
Requirement is We want to know who many users/projects are calling our common functions. Note - not exposed as APIs, exposed as jar Any way to achieve this.
Your help is appreciated.
...ANSWER
Answered 2021-Jun-11 at 10:20Assuming there are logs generated.
You could use Logstash to consume your logs and push into Elastic Search.
Logstash dynamically ingests, transforms, and ships your data regardless of format or complexity. Derive structure from unstructured data with grok, decipher geo coordinates from IP addresses, anonymize or exclude sensitive fields, and ease overall processing.
https://www.elastic.co/logstash
From Elastic Search, you have a lot of flexibility in how you aggregate data to figure our how many are using your function
You can look into Kibana for visual representation of such data as well.
====== Edited ========== In its simplest form, you will be able to find out:
- Project A is calling functionA()
- Project B is calling functionA(), and functionB()
You will not be able to tell which User, unless you are logging such information.
This all depends on what you are logging, what logstash is going to be parsing and pushing into Elastic Search.
QUESTION
I'd like to create a regex that would be able to grab everything up to and after DESCRIPTION, until the next TITLE: is found.
...ANSWER
Answered 2021-Jun-11 at 01:07/(?=TITLE: )/g
seems like a reasonable start. I'm not sure if the gutter of 2 characters whitespace is in your original text or not, but adding ^
or ^
to the front of the lookahead is nice to better avoid false-positives, i.e. /(?=^TITLE: )/mg
, /(?=^ TITLE: )/mg
or /(?=^ *TITLE: )/mg
.
QUESTION
I am writing a snakemake to produce Sars-Cov-2 variants from Nanopore sequencing. The pipeline that I am writing is based on the artic network, so I am using artic guppyplex
and artic minion
.
The snakemake that I wrote has the following steps:
- zip all the
fastq
files for all barcodes (rulezipFq
) - perform read filtering with
guppyplex
(ruleguppyplex
) - call the
artic minion
pipeline (ruleminion
) - move the stderr and stdout from qsub to a folder under the working directory (rule
mvQsubLogs
)
Below is the snakemake that I wrote so far, which works
...ANSWER
Answered 2021-Jun-08 at 15:40The rule that fails is rule guppyplex
, which looks for an input in the form of {FASTQ_PATH}/{{barcode}}
.
Looks like the wildcard {barcode}
is filled with barcode49/barcode49.consensus.fasta
, which happened because of two reasons I think:
First (and most important): The workflow does not find a better way to produce the final output. In rule catFasta
, you give an input file which is never described as an output in your workflow. The rule minion
has the directory as an output, but not the file, and it is not perfectly clear for the workflow where to produce this input file.
It therefore infers that the {barcode}
wildcard somehow has to contain this .consensus.fasta
that it has never seen before. This wildcard is then handed over to the top, where the workflow crashes since it cannot find a matching input file.
Second: This initialisation of the wildcard with sth. you don't want is only possible since you did not constrain the wildcard properly. You can for example forbid the wildcard to contain a .
(see wildcard_constraints
here)
However, the main problem is that catFasta
does not find the desired input. I'd suggest changing the output of minion
to "nanopolish/{barcode}/{barcode}.consensus.fasta"
, since the you already take the OUTDIR from the params, that should not hurt your rule here.
Edit: Dummy test example:
QUESTION
first time writing here on stackoverflow. (You bet I'm a noob in Android development)
I've been experimenting with a quasi-Spotify clone app that has a Recyclerview showing song thumbnails & load mp3s from Firestore db via URL. The app is displaying images using Glide and plays mp3 using ExoPlayer.
All is working fine except the loading of images (about 12 of them currently) got a bit slower after I've enabled ExoPlayer to play using Cache. Before implementing Cache for ExoPlayer Glide displayed image immediately upon launch (less than 1 second) but after using Cache for ExoPlayer it takes about 3~4 seconds to display 6~7 rows of Recyclerview.
ExoPlayer prep BEFORE using cacheDataSoruce
...ANSWER
Answered 2021-Jun-08 at 03:23After struggling (and excessive searching) for about a week, I've found a solution to this. It turns out that ExoPlayer and Glide were sharing the same folder and SimpleCache's constructor was deleting Glide's cache as they were unrecognized files.
You can solve this issue by using a different location for your ExoPlayer's cache (or adding a subfolder)
Source link: https://github.com/bumptech/glide/issues/4429#issuecomment-737870711
QUESTION
The source code to the resulting JAR is in my project, abc.
The packaging of my pom.xml is "jar".
When I have done mvn package
I would like to see my JAR on the path ~/.m2/repository/com/acme/abc/abc/1.0.0/abc-1.0.0.jar (with all the other files there .md5, .sha1, .pom, etc.) so that I can pick it up from any other project. (This is in lieu of putting my JAR into Maven Central or Nexus, etc.)
I have been exploring maven-install-plugin with install-jar-lib, install-file, etc., different configuration, but to no avail.
When I build (mvn package
), I do not see ~/.m2/repository/com/acme/abc... at all yet under my local target directory, I see abc-1.0.0.jar. However, it appears that mvn install
does the job.
ANSWER
Answered 2021-Jun-07 at 20:21You simply have to run the command mvn install
to get your artifact into your maven local repository.
QUESTION
I'm trying to run SoapUI tests by using mvn commands, and I keep seeing this exception in every JDBC request, although the tests pass and the database is accessed."
The dependency for PostgreSQL is added in maven.
Log:
...ANSWER
Answered 2021-Jun-07 at 07:35I Java a JDBC driver can be loaded automatically from classpath, that is why it still works.
I think there is a line in your Groovy teardown script that looks like this:
QUESTION
I’m having this weird error when deploying to nexus.
...ANSWER
Answered 2021-Jun-04 at 17:18In case anyone comes to this error. Even configuring the proxy at server and container level didn't worked. I'd found out that Jenkins has a proxy configuration at the application level. So I went into Jenkins, Administration section and configured the proxy properly. After that was done, it all started to work.
QUESTION
For an Android app that uses Jeremy Feinstein's SlidingMenu and targets API level 29, a problem has recently been noted on 2 devices (Samsung Galaxy A01 and Samsung Galaxy Note20 Ultra, running Android 11) whereby the content at the bottom of the screen is covered by the navigation bar.
The only thing that has made a difference on the 2 affected devices is adding this in the sliding menu constructors:
...ANSWER
Answered 2021-Jun-04 at 06:25The problem was a navigation bar height calculation, which had to be adjusted for devices with display cutouts, thanks to @JohnLord for picking up on that difference.
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