A collection of quickstarts for Kogito that illustrates various uses case covered.
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CoolWallet Android app
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Compliance test suite for the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
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Reliable Genome project
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Super-resolution radial fluctuations (SRRF)
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A efficient peak finder for high coverage ChIP-seq experiments, written in python.
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Pipeline for Evaluating Prokaryotic References
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Encore Analysis Server
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An efficient Variant-Caller to highlight low allele-frequency tumor mutations in a clinical practice
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Using Machine Learning to Identify Glioblastoma patients with NF1 inactivation
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A responsive chatbot AI that helps you develop medical insurance appeals
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Predicts if Protein will reside in the protein corona on the surface of engineered nanomaterials
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Generate the UMI count matrix from CEL-Seq2 sequencing data
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An Attention-based Bi-GRU-CapsNet Model for Hypernymy Detection between Compound Entities
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Scripts used to generate the ClinVar conflicting classifications dataset on Kaggle
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Stochastic PDHG with Arbitrary Sampling and Imaging Applications
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SwasthyaChain-BlockChain-Based-Health-Management-Systemby gyaneshanand
Python 
10 Version:Current
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License: No License (No License)The project aims to use blockchain technology to create a user-focused electronic health record whilst maintaining a single true version of the user’s data.Swasthya Mitra is a decentralised platform that enables secure, fast and transparent exchange and usage of medical data.
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Segmentation of Blood Vessels from 3D Medical Image
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Big-Data-Analytics-in-Health-Careby dpaduvalli3
Python 10 Version:Current License: No License (No License)
License: No License (No License)Big Data Analytics in Health Care: This course introduced big data techniques and tools for analyzing and solving health care problems.
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Deep CNN for Abdominal Adipose Tissue Segmentation on Dixon MRI
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Code supporting the recent preprint Markello et al., 2020
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US Specific Coronavirus Dashboard's API, used for tracking current cases by county, state, COVID-19, hospital bed info, twitter feed, and news feed.
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"Help us understand how geography affects virality."
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Medical-AI is a AI framework specifically for Medical Applications https://aibharata.github.io/medicalAI/
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Remote monitoring of Covid-19 patients via REDCap survey tools
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Integrating AI to Clinical Workflow
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Decomposition-based peak identification, which find peaks across a large number of TSS (transcription starting site) profiles
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clinical-calculation-apiby open-health-hub
Ruby 10 Version:Current License: Strong Copyleft (AGPL-3.0)
presents a range of clinical calculations as a REST API, avoiding the need for the calculations to be implemented locally in applications
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Visual exploration of large genome interaction matrices with interactive small multiples.
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Fork of Chris Hafey's cornerstoneWADOImageLoader to load DICOM images from zipped DICOMDIR archives
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Node FHIR facade server built on Asymmetrik node-fhir-server-core.
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healthcare-api-token-generatorby GoogleCloudPlatform
JavaScript 10 Version:Current License: Permissive (Apache-2.0)
Enables developers to programmatically generate OAuth 2 access tokens for use with Apigee and the Google Cloud Healthcare API
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🦠 Coronavirus Tracker
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Covid-19 Virus Informational Gatsby Website
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Yet another form library for Kohana PHP
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genomics, biochemistry, biotechnology, cell biology, biophysics, ecology
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Emergency room simulator which is highly configurable and can simulate a broad range of scenarios. It can be used by medical professionals/researchers to determine bottlenecks and areas in the emergency room which would benefit most from added resources.
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🦠 Update a gist to contain global or country specific coronavirus stats
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A Delhi based COVID Tracker which provides you with accurate cases and for more features please download the app from link given below 😆😆
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Hospital-Management-Systemby acorn-labs-global
PHP 9 Version:Current License: No License (No License)
License: No License (No License)Hospital Management System, Research Based approach for doctors, nurses and management
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Hospital & Doctor Information System from Bangladesh. It has also Doctor admin panel to update a doctors information. One can also booking a doctor in this system
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“Health Information Provider” refers to clinical establishments which generate or store customer data in digital form. These include hospitals, primary or secondary health care centres, nursing homes, diagnostic centres, clinics, medical device companies and other such entities as may be identified by regulatory authorities from time to time
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Molecular beam experiment control code, and EDM data analysis software.
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OCR-for-Medical-Laboratory-Reportsby xuewenyuan
Python 9 Version:Current License: No License (No License)
License: No License (No License)Text Detection and Recognition from Images of Medical Laboratory Reports with Deep-Learning-Based Approach
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Python 9 Version:Current License: Permissive (MIT)
The project is used to do preprocessing on brain MR images.
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kogito-quickstartsby mswiderski
A collection of quickstarts for Kogito that illustrates various uses case covered.
Java 10Updated: 4 y ago License: No License (No License)
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coolwallet-androidby CoolBitX-Technology
CoolWallet Android app
Java 10Updated: 5 y ago License: No License (No License)
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complianceby ga4gh
Compliance test suite for the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
Java 10Updated: 7 y ago License: Permissive (Apache-2.0)
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wtchg-rgby popitsch
Reliable Genome project
Java 10Updated: 6 y ago License: Proprietary (Proprietary)
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NanoJ-SRRFby HenriquesLab
Super-resolution radial fluctuations (SRRF)
Java 10Updated: 4 y ago License: Proprietary (Proprietary)
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piqueby ryneches
A efficient peak finder for high coverage ChIP-seq experiments, written in python.
Python 10Updated: 5 y ago License: No License (No License)
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chipexoby ialbert
Python 10Updated: 6 y ago License: No License (No License)
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peprby usnistgov
Pipeline for Evaluating Prokaryotic References
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outLyzerby EtieM
An efficient Variant-Caller to highlight low allele-frequency tumor mutations in a clinical practice
Python 10Updated: 4 y ago License: No License (No License)
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nf1_inactivationby greenelab
Using Machine Learning to Identify Glioblastoma patients with NF1 inactivation
Python 10Updated: 4 y ago License: Permissive (BSD-3-Clause)
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med-appealby kevchn
A responsive chatbot AI that helps you develop medical insurance appeals
Python 10Updated: 4 y ago License: No License (No License)
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capstoneby auriml
Python 10Updated: 4 y ago License: No License (No License)
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ENM-Protein-Predictorby mfindlay23
Predicts if Protein will reside in the protein corona on the surface of engineered nanomaterials
Python 10Updated: 5 y ago License: Permissive (MIT)
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celseq2by yanailab
Generate the UMI count matrix from CEL-Seq2 sequencing data
Python 10Updated: 4 y ago License: Permissive (BSD-3-Clause)
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HPViewerby yuhanH
Python 10Updated: 4 y ago License: No License (No License)
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medicalHypernymyby ECUST-NLP-Lab
An Attention-based Bi-GRU-CapsNet Model for Hypernymy Detection between Compound Entities
Python 10Updated: 4 y ago License: No License (No License)
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clinvar-kaggleby arvkevi
Scripts used to generate the ClinVar conflicting classifications dataset on Kaggle
Python 10Updated: 4 y ago License: Permissive (MIT)
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spdhgby mehrhardt
Stochastic PDHG with Arbitrary Sampling and Imaging Applications
Python 10Updated: 4 y ago License: Weak Copyleft (MPL-2.0)
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SwasthyaChain-BlockChain-Based-Health-Management-Systemby gyaneshanand
The project aims to use blockchain technology to create a user-focused electronic health record whilst maintaining a single true version of the user’s data.Swasthya Mitra is a decentralised platform that enables secure, fast and transparent exchange and usage of medical data.
Python 10Updated: 4 y ago License: No License (No License)
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3D_Medical_Imagingby vinjk
Segmentation of Blood Vessels from 3D Medical Image
Python 10Updated: 4 y ago License: No License (No License)
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Big-Data-Analytics-in-Health-Careby dpaduvalli3
Big Data Analytics in Health Care: This course introduced big data techniques and tools for analyzing and solving health care problems.
Python 10Updated: 4 y ago License: No License (No License)
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FatSegNetby Deep-MI
Deep CNN for Abdominal Adipose Tissue Segmentation on Dixon MRI
Python 10Updated: 4 y ago License: Permissive (Apache-2.0)
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markello_ppmisnfby netneurolab
Code supporting the recent preprint Markello et al., 2020
Python 10Updated: 4 y ago License: Permissive (BSD-3-Clause)
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back-endby ncov19-us
US Specific Coronavirus Dashboard's API, used for tracking current cases by county, state, COVID-19, hospital bed info, twitter feed, and news feed.
Python 10Updated: 4 y ago License: Strong Copyleft (GPL-3.0)
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task-geoby CoronaWhy
"Help us understand how geography affects virality."
Python 10Updated: 3 y ago License: Permissive (MIT)
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medicalAIby aibharata
Medical-AI is a AI framework specifically for Medical Applications https://aibharata.github.io/medicalAI/
Python 10Updated: 4 y ago License: Permissive (Apache-2.0)
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corona-databy msghera
Python 10Updated: 4 y ago License: Strong Copyleft (GPL-3.0)
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txtmonby rmhcovid
Remote monitoring of Covid-19 patients via REDCap survey tools
Python 10Updated: 3 y ago License: Permissive (BSD-3-Clause)
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a
ai-4-clinical-workflowby zenetio
Integrating AI to Clinical Workflow
Python 10Updated: 4 y ago License: Permissive (MIT)
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dpi1by hkawaji
Decomposition-based peak identification, which find peaks across a large number of TSS (transcription starting site) profiles
Ruby 10Updated: 5 y ago License: Strong Copyleft (GPL-2.0)
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clinical-calculation-apiby open-health-hub
presents a range of clinical calculations as a REST API, avoiding the need for the calculations to be implemented locally in applications
Ruby 10Updated: 4 y ago License: Strong Copyleft (AGPL-3.0)
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hipilerby flekschas
Visual exploration of large genome interaction matrices with interactive small multiples.
JavaScript 10Updated: 4 y ago License: Permissive (MIT)
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c
cornerstoneArchiveImageLoaderby mbarnig
Fork of Chris Hafey's cornerstoneWADOImageLoader to load DICOM images from zipped DICOMDIR archives
JavaScript 10Updated: 2 y ago License: Permissive (MIT)
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fhir-facade-starterby Asymmetrik
Node FHIR facade server built on Asymmetrik node-fhir-server-core.
JavaScript 10Updated: 3 y ago License: Permissive (MIT)
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healthcare-api-token-generatorby GoogleCloudPlatform
Enables developers to programmatically generate OAuth 2 access tokens for use with Apigee and the Google Cloud Healthcare API
JavaScript 10Updated: 5 y ago License: Permissive (Apache-2.0)
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covid19Trackerby shayant98
🦠 Coronavirus Tracker
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COVIDby Quintessential-SFT
Covid-19 Virus Informational Gatsby Website
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morfby samsoir
Yet another form library for Kohana PHP
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biologyby HussainAther
genomics, biochemistry, biotechnology, cell biology, biophysics, ecology
Python 10Updated: 2 y ago License: No License (No License)
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V
Visualizerby ER-Visualizer
Emergency room simulator which is highly configurable and can simulate a broad range of scenarios. It can be used by medical professionals/researchers to determine bottlenecks and areas in the emergency room which would benefit most from added resources.
JavaScript 9Updated: 4 y ago License: Permissive (MIT)
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covid-boxby puf17640
🦠 Update a gist to contain global or country specific coronavirus stats
JavaScript 9Updated: 3 y ago License: Permissive (ISC)
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healthappby gauravdh9
A Delhi based COVID Tracker which provides you with accurate cases and for more features please download the app from link given below 😆😆
JavaScript 9Updated: 3 y ago License: No License (No License)
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Hospital-Management-Systemby acorn-labs-global
Hospital Management System, Research Based approach for doctors, nurses and management
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doctorby jahid56
Hospital & Doctor Information System from Bangladesh. It has also Doctor admin panel to update a doctors information. One can also booking a doctor in this system
PHP 9Updated: 5 y ago License: No License (No License)
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hip-serviceby ProjectEKA
“Health Information Provider” refers to clinical establishments which generate or store customer data in digital form. These include hospitals, primary or secondary health care centres, nursing homes, diagnostic centres, clinics, medical device companies and other such entities as may be identified by regulatory authorities from time to time
C# 9Updated: 4 y ago License: Permissive (MIT)
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EDMSuiteby ColdMatter
Molecular beam experiment control code, and EDM data analysis software.
C# 9Updated: 2 y ago License: Permissive (MIT)
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OCR-for-Medical-Laboratory-Reportsby xuewenyuan
Text Detection and Recognition from Images of Medical Laboratory Reports with Deep-Learning-Based Approach
Python 9Updated: 4 y ago License: No License (No License)
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Deep-PICO-Detectionby jind11
Python 9Updated: 3 y ago License: No License (No License)
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Preprocessing-Pipeline-on-Brain-MR-Imagesby NatLee
The project is used to do preprocessing on brain MR images.
Python 9Updated: 4 y ago License: Permissive (MIT)
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