gridss | GRIDSS : the Genomic Rearrangement IDentification Software | Genomics library

by PapenfussLab Java Version: v2.13.2 License: Non-SPDX

X-Ray Key Features Code Snippets Community Discussions(1)Vulnerabilities Install Support

kandi X-RAY | gridss Summary

gridss is a Java library typically used in Artificial Intelligence, Genomics applications. gridss has no bugs, it has no vulnerabilities, it has build file available and it has low support. However gridss has a Non-SPDX License. You can download it from GitHub.

GRIDSS: the Genomic Rearrangement IDentification Software Suite

Support

Quality

Security

License

Reuse

Support

gridss has a low active ecosystem.

It has 221 star(s) with 69 fork(s). There are 24 watchers for this library.

It had no major release in the last 12 months.

There are 55 open issues and 550 have been closed. On average issues are closed in 39 days. There are 6 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of gridss is v2.13.2

Quality

gridss has 0 bugs and 0 code smells.

Security

gridss has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

gridss code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

gridss has a Non-SPDX License.

Non-SPDX licenses can be open source with a non SPDX compliant license, or non open source licenses, and you need to review them closely before use.

Reuse

gridss releases are available to install and integrate.

Build file is available. You can build the component from source.

gridss saves you 58576 person hours of effort in developing the same functionality from scratch.

It has 67728 lines of code, 5817 functions and 650 files.

It has high code complexity. Code complexity directly impacts maintainability of the code.

Top functions reviewed by kandi - BETA

kandi has reviewed gridss and discovered the below as its top functions. This is intended to give you an instant insight into gridss implemented functionality, and help decide if they suit your requirements.

Write the object to output stream
Converts a base - encoded base byte to its compressed representation
Converts a byte to a compressed ny - byte representation
Converts the byte array into a compressed byte array
Executes the analysis
Cleans a reference sequence
Count the hits in the given sequence
Checks to see if there is enough data to read
Creates a summary line
Execute the analysis
Read all reads
Initialize the input file
Tries to traverse a path using the given parameters
This method is used to calculate the non - overlapping set of SAX tags
Writes the variables
Converts VCF configuration to breakpointNotation at the moment
Exports the loaded graph to a file
Main entry point
Sets the local language - neutral locale
Extract other other canonical alignments from a SAM record
Export the overlapping overlap string
Re - align the given SAMRecord to a window
Exports the overlap string into a file
Initialize the language file
Initializes the file
Generates a subgraph for the given seed

Get all kandi verified functions for this library.

gridss Key Features

No Key Features are available at this moment for gridss.

gridss Examples and Code Snippets

No Code Snippets are available at this moment for gridss.

Community Discussions

Trending Discussions on gridss

Trouble with refering to a variable in mouseover event

QUESTION

Trouble with refering to a variable in mouseover event

Asked 2018-Feb-28 at 11:06

I want to make an event where .gridss change colors with mouseover event. Problem is gridss comes out as not definied,and if i try to move the mouseover event into the the gridss function it also does not work. So how can I successfully refer to .gridds?

My question is pretty simple yet i cant seem to get it right,so thanks in advance.

...

ANSWER

Answered 2018-Feb-28 at 11:06

Use jQuery for events if you are using jQuery. I assume that you are not aware of mouseout or mouseleave because it looks like you are using setTimeout() to trigger a delay of text color reverting back to original color. I used mouseenter and mouseleave which are similar to mouseover and mouseout events.

You had an error which that gridss wasn't defined. The reason why moving in and out of functions didn't work is because you defined gridss with let.

let is limited scope to that of the block
var scope is the function which works as long as you have gridss in the function.

Demo

Source https://stackoverflow.com/questions/49026994

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install gridss

You can download it from GitHub.
You can use gridss like any standard Java library. Please include the the jar files in your classpath. You can also use any IDE and you can run and debug the gridss component as you would do with any other Java program. Best practice is to use a build tool that supports dependency management such as Maven or Gradle. For Maven installation, please refer maven.apache.org. For Gradle installation, please refer gradle.org .

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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