irida | Integrated Rapid Infectious Disease Analysis Platform | Genomics library

by phac-nml Java Version: 23.01.3 License: Apache-2.0

X-Ray Key Features Code Snippets Community Discussions(1)Vulnerabilities Install Support

kandi X-RAY | irida Summary

irida is a Java library typically used in Artificial Intelligence, Genomics applications. irida has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. However irida build file is not available. You can download it from GitHub.

IRIDA is Canada’s Integrated Rapid Infectious Disease Analysis Platform for Genomic Epidemiology. More information can be found in the following links.

Support

Quality

Security

License

Reuse

Support

irida has a low active ecosystem.

It has 40 star(s) with 30 fork(s). There are 12 watchers for this library.

It had no major release in the last 12 months.

There are 166 open issues and 304 have been closed. On average issues are closed in 481 days. There are 12 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of irida is 23.01.3

Quality

irida has no bugs reported.

Security

irida has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

irida is licensed under the Apache-2.0 License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

irida releases are available to install and integrate.

irida has no build file. You will be need to create the build yourself to build the component from source.

Top functions reviewed by kandi - BETA

kandi has reviewed irida and discovered the below as its top functions. This is intended to give you an instant insight into irida implemented functionality, and help decide if they suit your requirements.

Get the specified lines from an analysis file
Read chunk of data
Read lines from a file
Read a number of lines from a file
Generate SQL statements to be copied from the database
Returns the previous output file ID
Creates the files for the chart
Creates the submissions for the given sequence file
Creates an analysis submitter
Format a recent activity for a user - defined event
Gets the list of analysis input files for the specified analysis
Organizes the list of uploaded files to be paired up or paired up
Demonstrates how to run
Gets the sistr analysis information
Copy a sample to a project
Adds the bio_ansel results to the metadata
Adds a new Fast5 file to a sample
Upload a new genome assembly to a sample
Installs the security context around the given method
Authenticates the given authentication
Gets the metadata for a project samples
Gets the HTML page for a given submission
Add a new sequence file pair to a sample
Format a project user - defined activity
Generates the SQL SISTR files to insert the database into the database
Adds a new sequence file to a sample

Get all kandi verified functions for this library.

irida Key Features

No Key Features are available at this moment for irida.

irida Examples and Code Snippets

No Code Snippets are available at this moment for irida.

Community Discussions

Trending Discussions on irida

Filter nested objects in ElasticSearch 6.8.1

QUESTION

Filter nested objects in ElasticSearch 6.8.1

Asked 2020-Mar-20 at 19:02

I didn't find any answers how to do simple thing in ElasticSearch 6.8 I need to filter nested objects.

Index ...

ANSWER

Answered 2020-Mar-20 at 14:57

You could use something like this:

Source https://stackoverflow.com/questions/60776473

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install irida

You can download it from GitHub.
You can use irida like any standard Java library. Please include the the jar files in your classpath. You can also use any IDE and you can run and debug the irida component as you would do with any other Java program. Best practice is to use a build tool that supports dependency management such as Maven or Gradle. For Maven installation, please refer maven.apache.org. For Gradle installation, please refer gradle.org .