MAGIC | Markov Affinity-based Graph Imputation | Genomics library
kandi X-RAY | MAGIC Summary
kandi X-RAY | MAGIC Summary
Markov Affinity-based Graph Imputation of Cells (MAGIC) is an algorithm for denoising high-dimensional data most commonly applied to single-cell RNA sequencing data. MAGIC learns the manifold data, using the resultant graph to smooth the features and restore the structure of the data. To see how MAGIC can be applied to single-cell RNA-seq, elucidating the epithelial-to-mesenchymal transition, read our publication in Cell. MAGIC has been implemented in Python, Matlab, and R.
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MAGIC Key Features
MAGIC Examples and Code Snippets
def solution(gon_side: int = 5) -> int:
"""
Find the maximum number for a "magic" gon_side-gon ring
The gon_side parameter should be in the range [3, 5],
other side numbers aren't tested
>>> solution(3)
432621513
public static int getKthMagicNumber(int k) {
if (k < 0) {
return 0;
}
int val = 0;
Queue queue3 = new LinkedList();
Queue queue5 = new LinkedList();
Queue queue7 = new LinkedList();
queue3.add(1);
for (int i = 0; i <= k; i++)
def is_magic_gon(numbers: list[int]) -> bool:
"""
Check if the solution set is a magic n-gon ring
Check that the first number is the smallest number on the outer ring
Take a list, and check if the sum of each 3 numbers chunk is equ
Community Discussions
Trending Discussions on MAGIC
QUESTION
In the app, going File > Workspace > Sign in to new workspace launches a browser window. After selecting the workspace in browser, it launches back a deep link back to slack but it doesn't work. Nothing happens on the slack-desktop.
Attempting to find out what is going on, I run the /usr/bin/slack to take a look at the logs.
I see logs of HANDLE_DEEP_LINK but no follow up activity.
...ANSWER
Answered 2022-Jan-26 at 16:40After trying various things, I noticed that what I suspect to be the workspace id, tlvs8sasf
above are often in CAPS in the logs.
So, I tried updating the deep link by upper casing the workspace id, then click on it. Voila, it worked for me. Hope this helps anyone else also suffering from this same issue.
QUESTION
I got up and running with Visual Studio 2022 Preview for a couple of days now.
Got the first shock, there is no Startup.cs. Thats ok, a bit of reading, I know Startup is removed.
Today got another slap. I see no using statements. Here it is.
I just created a brand new .NET 6 web app and as I hover over the WebApplication class, I realized it stays in Microsoft.AspNetCore.Builder namespace. And the generated Program.cs class looks like this.
So where is the using Microsoft.AspNetCore.Builder;
statement?
Whats the magic? Why is .net becoming mystical by the day?
The full Program.cs file is as follows.
...ANSWER
Answered 2022-Mar-15 at 17:03C# 10.0 introduces a new feature called global using directive (global using ;
) which allows to specify namespaces to be implicitly imported in all files in the compilation. .NET 6 RC1 has this feature enabled by default in new project templates (see enable
property in your .csproj).
For Microsoft.NET.Sdk.Web
next namespaces should be implicitly imported (plus the ones from Microsoft.NET.Sdk
):
- System.Net.Http.Json
- Microsoft.AspNetCore.Builder
- Microsoft.AspNetCore.Hosting
- Microsoft.AspNetCore.Http
- Microsoft.AspNetCore.Routing
- Microsoft.Extensions.Configuration
- Microsoft.Extensions.DependencyInjection
- Microsoft.Extensions.Hosting
- Microsoft.Extensions.Logging
UPD
To address your questions in comment:
At the moment of writing the generated file containing default imports will be inside the obj
folder named something like ProjectName.GlobalUsings.g.cs
.
To modify default imports you can add Using
element to your .csproj
file. Based on exposed attributes it allows several actions including addition and removal:
QUESTION
A standard idiom is
...ANSWER
Answered 2022-Mar-14 at 22:53The boolean conversion operator for std::basic_istream
is explicit
. This means that instances of the type will not implicitly become a bool
but can be converted to one explicitly, for instance by typing bool(infile)
.
Explicit boolean conversion operators are considered for conditional statements, i.e. the expression parts of if
, while
etc. More info about contextual conversions here.
However, a return statement will not consider the explicit
conversion operators or constructors. So you have to explicitly convert that to a boolean for a return
.
QUESTION
When I do this it works (these are the last 4 lines before the end of a method TWEAK. However, my first attempt had no line #3 and failed because %!columns was empty...
...ANSWER
Answered 2022-Feb-23 at 19:56Without the %!columns
on line three, the call to map
is lazy and thus never gets evaluated (the %!columns
call wants to check the current value of columns, which implies eagerness).
To more explicitly invoke eagerness, either use the eager
statement prefix (shown below) or switch to a for
loop, which is eager by default.
I think this code will behave the way you want it to:
QUESTION
This follows as a result of experimenting on Compiler Explorer as to ascertain the compiler's (rustc's) behaviour when it comes to the log2()
/leading_zeros()
and similar functions. I came across this result with seems exceedingly both bizarre and concerning:
Code:
...ANSWER
Answered 2021-Dec-26 at 01:56Old x86-64 CPUs don't support lzcnt
, so rustc/llvm won't emit it by default. (They would execute it as bsr
but the behavior is not identical.)
Use -C target-feature=+lzcnt
to enable it. Try.
More generally, you may wish to use -C target-cpu=XXX
to enable all the features of a specific CPU model. Use rustc --print target-cpus
for a list.
In particular, -C target-cpu=native
will generate code for the CPU that rustc itself is running on, e.g. if you will run the code on the same machine where you are compiling it.
QUESTION
I an Azure Pipeline on a self-hosted agent I use this task
...ANSWER
Answered 2021-Nov-27 at 06:57This issue is caused by Azure CLI version 2.30.0 which seemed to be rolled out MS hosted agents recently.
Hence I adapted all my Python scripts running on (MS and self) hosted agents to this model:
QUESTION
In Blazor, how can I undo invalid user input, without changing the state of the component to trigger a re-render?
Here is a simple Blazor counter example (try it online):
...ANSWER
Answered 2021-Nov-18 at 20:12Here's a modified version of your code that does what you want it to:
QUESTION
I have disabled Browser Link inside Visual Studio 2022, and I have also disabled all the Hot Reload functionality.
Even the Browser Link Dashboard indicates it should be disabled:
I also do not use any of the app.UseBrowserLink();
code anywhere in my code. (as documented in Browser Link in ASP.NET Core.
However, these middlewares still somehow appear in the request pipeline:
Microsoft.AspNetCore.Watch.BrowserRefresh.BrowserRefreshMiddleware
Microsoft.WebTools.BrowserLink.Net.BrowserLinkMiddleware
These middlewares add this to my HTML:
...ANSWER
Answered 2021-Nov-14 at 03:44QUESTION
I have following cells:
...ANSWER
Answered 2021-Nov-08 at 08:43I had a really quick attempt at this with Numba but have not checked it too thoroughly though the results seem about right:
QUESTION
Consider a class Bar
in two versions of a library:
ANSWER
Answered 2021-Sep-21 at 04:13This seems to work:
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install MAGIC
To use MAGIC, you will need to install both the R and Python packages. If python or pip are not installed, you will need to install them. We recommend Miniconda3 to install Python and pip together, or otherwise you can install pip from https://pip.pypa.io/en/stable/installing/.
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