scotch | Scotch pipeline for indel | Genomics library
kandi X-RAY | scotch Summary
kandi X-RAY | scotch Summary
Scotch pipeline for indel calling.
Support
Quality
Security
License
Reuse
Top functions reviewed by kandi - BETA
- Process a variant
- Return the alternative name for a reference
- Write a variant
- Get UCSC region for a given chromosome
- Records soft clipping
- Records a feature
- Find the query position for an edge in the given read position
- Process CIGAR string
- Get the features at a given position
- Calculates the similarity of a given position
- Validate features for a stage
- Get features depth - depth stage
- Validate features nReads
- Unclip bam
- Normalize the base features
- Normalize delta_feats
- Return a BaseFeats object
- Run predict
- Validate region features
- Write vcf header
- Calculate DeltaFeats
- Return a list of normalized attributes
- Retrieve features read
- Rmdup - bam - bam
- Extract the Qualities from a read
- Sort the output by position
scotch Key Features
scotch Examples and Code Snippets
Community Discussions
Trending Discussions on scotch
QUESTION
and I am trying to create a double layered pie, here is my data:
...ANSWER
Answered 2021-Apr-30 at 23:17did you mean something like this:
QUESTION
I would like to know how to webscrape a popup on a new page with selenium (or another framework). The Python code below clicks on a button then a new page opens but I don't know to copy/paste the promo code. Can you help ?
...ANSWER
Answered 2021-Apr-27 at 21:02By clicking self.driver.find_element_by_xpath('//body/div[@id="main"]/div[1]/div[1]/div[3]/div[1]/div[1]/div[1]/div[3]/div[1]/div[1]/a[1]').click() a new tab is opened.
Now you have to switch driver to the new tab with driver.switch_to.window(driver.window_handles[-1])
When on the new tab you can get the text from element located by //div[@class='coupon-code'] xpath
Now you can close the new opened tab by driver.close
And switch back to the previous tab by driver.switch_to.window(driver.window_handles[0])
See more details here
QUESTION
I am fairly new to Google sheets, and essentially what I am trying to do is remove all non-duplicate values that do not exist or is listed in another sheet or row - and also store the non-duplicate values somewhere else
In my example sheet here, I am trying to only keep the Alcohol names that are listed in column G
So in my case, I only want to keep the following records:
...ANSWER
Answered 2021-Mar-30 at 20:24Use this formula to only keep the Alcohol names that are listed in column G
QUESTION
I currently have a table with alchohol name, type and origin which can be found in this Google Sheet.
This is what the table looks like:
...ANSWER
Answered 2021-Mar-31 at 18:06Use this formula
QUESTION
I don't seem to be able to figure out why this is not working
My Hapi.js index.ts looks like this:
...ANSWER
Answered 2021-Mar-27 at 09:15You can do either of the following:
QUESTION
I am struggling to create an algorithm, which takes an array of sibling elements (abstract representations of DOM nodes) and returns that array enhanced with nesting. The nesting rule is quite simple: Every heading starts a new section, which spans until the next heading of the same level (or end of the list). Every section can have more nested sections in it, with the same rule.
Background: I am trying to convert AST from my CMS to a structure presented in Chris Coyers post about the interactive sticky table of contents. Currently, i am using only headings to create a similar effect, (e.g. scotch.io), but the effect is not so slick.
I was able to create some nesting, but my brain doesn't enjoy recursive algorithm like this much, and I've got stuck with at least one bug – one part of nesting is padded with a needless array (note the first "heading3" and so on).
What I've got so far:
...ANSWER
Answered 2021-Mar-14 at 23:52Generally when writing a recursive algorithm, I avoid copies or sub-copies of the source array, and instead opt for an index to track the current position in the source array, primarily to avoid the performance hit of array copying. And typically I find that it is a cleaner function interface to have the main function require the minimal parameters, and embed within this main function the actual recursive function along with the initialization of any variables required by the recursive function.
I've embedded a couple of comments in the code below to assist in understanding the recursion logic.
QUESTION
Reposting as a corrected version of this question. I have reviewed this, but it didn't help me deal with unknown array nestings.
EDIT: Added information on why Lodash _.get won't work. Here's a Stackblitz. There's an npm library, Object-Scan that would work -- but, I can't get Angular to play nice with that package.
This is for a column renderer component in an Angular app. The user selects a column to display, and the column is mapped to whatever it is. So, in the below example, if user selects to display "Categories", and it is mapped to "interests[categories]", the function then needs to go find values that correspond to that mapping in the data.
Sample data:
...ANSWER
Answered 2021-Jan-14 at 04:55Why reinvent the wheel? What you describe is exactly what the Lodash get function does. See https://lodash.com/docs/4.17.15#get
If you really want to have a "vanilla" solution, peek how they do it. See https://github.com/lodash/lodash/blob/master/get.js
QUESTION
its image showing value and search bar
it is the image showing when clicking the search bar it will come up the values in list-view
I want to know why this happen and how to avoid the situation please help me thanks in advance
...ANSWER
Answered 2021-Feb-26 at 08:15I think with ConstraintLayout , you can use app:layout_constraintTop_toBottomOf to assign it below the desired view instead of layout_below
QUESTION
How to set multiple input channels to output to the same destanation
I have the following configuration:
...ANSWER
Answered 2021-Feb-16 at 10:03I'd suggest going with something like so (based on this):
QUESTION
This is the code for check the quantity value is empty else do the calculation
...ANSWER
Answered 2021-Feb-02 at 06:16getstock.setOnClickListener(new View.OnClickListener() {
@Override
public void onClick(View v) {
Intent i = new Intent(AddOrder.this, ListItem.class);
Intent intent = getIntent();
Bundle bd = intent.getExtras();
if (bd != null) {
String getname = (String) bd.get("position");
getstock.setText(getname);
System.out.println(getname);
if(getstock.getText().toString().equals("Stove Top Stuffing")) {
taxgiven.setText("12");
stockgiven.setText("250");
rategiven.setText("598.214");
MRPRate.setText("999");
//Showqty.setText(addorder.getText().toString());
// ShowRate.setText(TaxInclrate.getText().toString());
//percentage calculation
double taxamount = Double.parseDouble(taxgiven.getText().toString());
double rateamount = Double.parseDouble(rategiven.getText().toString());
Double result = ((double)Math.round(rateamount* taxamount) / 100);
Double finalamount=(result + rateamount);
TaxInclrate.setText(""+finalamount);
}
else if(getstock.getText().toString().equals("Campell's Soup"))
{
taxgiven.setText("5");
stockgiven.setText("100");
rategiven.setText("150");
MRPRate.setText("456");
//percentage calculation
double taxamount = Double.parseDouble(taxgiven.getText().toString());
double rateamount = Double.parseDouble(rategiven.getText().toString());
Double result = ((double)rateamount* taxamount) / 100;
Double finalamount=(result + rateamount);
TaxInclrate.setText(""+finalamount);
}
else if(getstock.getText().toString().equals("Tide"))
{
taxgiven.setText("5");
String a=taxgiven.getText().toString();
stockgiven.setText("50");
rategiven.setText("200");
MRPRate.setText("1000");
//percentage calculation
double taxamount = Double.parseDouble(taxgiven.getText().toString());
double rateamount = Double.parseDouble(rategiven.getText().toString());
Double result = ((double)rateamount* taxamount) / 100;
Double finalamount=(result + rateamount);
TaxInclrate.setText(""+finalamount);
}
}
startActivity(i);
}
});
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install scotch
Support
Reuse Trending Solutions
Find, review, and download reusable Libraries, Code Snippets, Cloud APIs from over 650 million Knowledge Items
Find more librariesStay Updated
Subscribe to our newsletter for trending solutions and developer bootcamps
Share this Page
