stmp | Medical Phenotypes : A pipeline featuring variant annotation | Genomics library

 by   AshleyLab Python Version: v1.3.1 License: No License

kandi X-RAY | stmp Summary

kandi X-RAY | stmp Summary

stmp is a Python library typically used in Telecommunications, Media, Media, Entertainment, Artificial Intelligence, Genomics applications. stmp has no bugs, it has no vulnerabilities and it has low support. However stmp build file is not available. You can download it from GitHub.

The toolkit currently uses an SQLite database for added portability.
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            kandi-support Support

              stmp has a low active ecosystem.
              It has 9 star(s) with 3 fork(s). There are 10 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              There are 2 open issues and 3 have been closed. On average issues are closed in 32 days. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of stmp is v1.3.1

            kandi-Quality Quality

              stmp has 0 bugs and 0 code smells.

            kandi-Security Security

              stmp has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              stmp code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              stmp does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              stmp releases are available to install and integrate.
              stmp has no build file. You will be need to create the build yourself to build the component from source.
              Installation instructions are not available. Examples and code snippets are available.
              It has 3969 lines of code, 164 functions and 21 files.
              It has high code complexity. Code complexity directly impacts maintainability of the code.

            Top functions reviewed by kandi - BETA

            kandi has reviewed stmp and discovered the below as its top functions. This is intended to give you an instant insight into stmp implemented functionality, and help decide if they suit your requirements.
            • Return a YAML representation of a dict
            • Write yaml files
            • Get the dataset metadata
            • Parse YAML files
            • Load a yaml stream from a stream
            • Parse a YAML file
            • Given a dataset name return the corresponding dataset name
            • Checks if the given dataset exists
            Get all kandi verified functions for this library.

            stmp Key Features

            No Key Features are available at this moment for stmp.

            stmp Examples and Code Snippets

            No Code Snippets are available at this moment for stmp.

            Community Discussions

            QUESTION

            PowerQuery - dynamic change of the year
            Asked 2022-Apr-08 at 13:35

            I'm unpivoting and transposing (input) in order to have (output) formatted for internal systems. Solution provided by @RonRosenfeld in solution solved the issue.

            However year for output is hard coded to 2022, which is fine until we'll reach 2nd half of the year, then I'd like to dynamically change new months to 2023 i.e. 01.2023, 02.2023...

            I couldn't come up with dynamical solution so I tried "Fiscal year" which doesn't work even after modifying data type.

            [Input]

            [Output]

            ...

            ANSWER

            Answered 2022-Apr-08 at 13:35

            QUESTION

            Why would a function keyword not be recognized inside a
            Asked 2022-Mar-23 at 18:23

            I am creating an emailing function on a website. The concept is that a button will automatically send an attachment to a pre-programmed email address, but the script cannot recognize the "function" keyword as such and treats it as plain text. I am doing it with SMTPJS and this is the code:

            ...

            ANSWER

            Answered 2022-Mar-23 at 16:21

            You can't have both an src in a

            Source https://stackoverflow.com/questions/71590507

            QUESTION

            Error: connect ETIMEDOUT xxx.xx.xxx.xxx:587 Nodemailer script stopped working with outlook throws
            Asked 2022-Feb-03 at 18:07

            A few months ago I created this script to help me send multiple mails at once instead of sending them one by one, and it was working perfectly till now.

            For this script, I've used dotenv, nodemailer, and nodemon (only in development, when I finished it I started using npm run start to run it)

            ...

            ANSWER

            Answered 2022-Feb-03 at 15:29

            go to

            Settings => View All Outlook settings => Mail => Sync email

            here is info for your correct settings IMAP, POP, SMTP

            Source https://stackoverflow.com/questions/70965083

            QUESTION

            imaplib - Moving mails to a folder fails without an error log
            Asked 2021-Nov-24 at 18:26

            My python code selects some mails and move them to another folder.

            ...

            ANSWER

            Answered 2021-Nov-24 at 18:26

            Don't select the folder you're moving to. UIDs are only meaningful in their source folder. You're switching to the destination folder, then trying to move a message out of it, and that message doesn't exist.

            Remove this line: typ, data = self.mail.select(archiving_folder)

            Or, at least, if you need it to check that the destination folder exists, you must switch back to the source folder: self.mail.select('INBOX') or similar.

            Source https://stackoverflow.com/questions/70078441

            QUESTION

            Check for mail server SMTPUTF8 support
            Asked 2021-Nov-09 at 08:26

            I have a system where (registered) users have the possibility to add their own SMTP server for mail sending. Thus I don't know in advance what server a user might add and whether this one supports SMTPUTF8. Now starting from JavaMail 1.6 support for SMTPUTF8 has been added. After enabling this for some servers the following line is printed to the log:

            mail.mime.allowutf8 set but server doesn't advertise SMTPUTF8 support

            This is correct for that server, however how can I detect whether a server supports this or not? I see two possibilities:

            1. Somehow detect whether a mail server supports SMTPUTF8 - if that is possible?
            2. Add another parameter to the stmp configuration and then the users decide (which in most cases they don't really know I would guess)

            So is there a way to detect whether a server supports SMTPUTF8?

            I checked the implementation and the com.sun.mail.SMTPTransport seems to provide such a query possibility.

            public boolean supportsExtension(String ext)

            So calling

            ...

            ANSWER

            Answered 2021-Nov-09 at 08:26

            Using ESMTP with the EHLO command one can query the smtp server for supported extensions. mail.smtp.ehlo=true; must be enabled.

            Source https://stackoverflow.com/questions/69885806

            QUESTION

            org.h2.jdbc.JdbcSQLSyntaxErrorException h2 database java
            Asked 2021-Nov-05 at 16:00

            Exception in thread "main" org.h2.jdbc.JdbcSQLSyntaxErrorException: Syntax error in SQL statement "INSERT INTO SMTP_DATA(SMTP_SERVER, SMTP_USERNAME, SMTP_PASSWORD, SMTP_FROM, SMTP_TO) VALUES (DEMO.STMP.COM, DEMOUSERNAME, DEMOPASSWORD, FROMDEMO@[*]MAIL.COM, TODEMO@MAIL.COM);"; expected "(, ., [, ::, AT, FORMAT, *, /, %, +, -, ||, ~, !~, NOT, LIKE, ILIKE, REGEXP, IS, IN, BETWEEN, AND, OR, ,, )"; SQL statement:

            I am kind new to h2 and sql statments I try to insert values to table

            ...

            ANSWER

            Answered 2021-Nov-05 at 15:59

            String literals need to be in ' symbols. So, whenever you write a table or column name, just write it. But when you write actual data, use ': INSERT INTO smtp_data(smtp_server) VALUES ('put this stuff in quotes');

            HOWEVER

            This should NEVER come up. The problem is, usually input is not exactly 'safe'. Some user entered it someplace (and who knows what malicious intent they might have), or somebody who doesn't know the exact process flow of this app did it. Even if currently you don't think that can happen, software has the nasty tendency to be used for things that you didn't imagine it would be used for when you write it. Hence, this is a huge security disaster waiting to happen. After all, what if somebody tries, for funsies, this SMTP server:

            Source https://stackoverflow.com/questions/69855894

            QUESTION

            Why does PHPMailer fail to connect to my SMTP server
            Asked 2021-Jul-07 at 21:20

            PHPMailer version: 6.5.0

            When I am trying to connect my PHPMailer script with my SMTP server I am getting this error:

            ...

            ANSWER

            Answered 2021-Jul-07 at 21:20

            It cannot resolve mail.solninjaa.com, and neither can I.

            You at least have a DNS problem.

            Source https://stackoverflow.com/questions/68293038

            QUESTION

            VB.NET MySQL : Error 'Unable to cast object of type 'System.Int32' to type 'MySql.Data.MySqlClient.MySqlDataReader
            Asked 2021-May-16 at 02:35

            I have trouble with my coding below :

            ...

            ANSWER

            Answered 2021-May-12 at 19:56

            Change drtmp = mySqlCmd.ExecuteScalar() to drtmp = mySqlCmd.ExecuteReader(). The method ExecuteScalar() returns the first column of the first row in the result and ignore others. In this instance, the returned column is integer data type, and not an array.

            Use:

            Source https://stackoverflow.com/questions/67508552

            QUESTION

            C++ Unable to display or read the whole txt file
            Asked 2021-Apr-02 at 07:51

            When the system tried to output, it only read the last line twice in the text file since I have two lines. I want to display all the movies. Thanks programming language: C++ Container used:

            ...

            ANSWER

            Answered 2021-Apr-02 at 07:51

            It's pretty simple. Take a look here:

            Source https://stackoverflow.com/questions/66915733

            QUESTION

            Trouble with adding information to JSON library in Python
            Asked 2021-Feb-16 at 17:14

            So I have been trying to build out a dynamic JSON library with python recently, and I'm having problems with looping through data. This problem is likely an easy fix but I am very new to programming and especially new to working with JSON.

            Basically, I am trying to come out with a JSON output that looks similar to this:

            ...

            ANSWER

            Answered 2021-Feb-16 at 17:14

            I don't think this data structure will do you any favors but here is a super simple list comprehension to get it done:

            Source https://stackoverflow.com/questions/66225489

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install stmp

            You can download it from GitHub.
            You can use stmp like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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