adapt | designing activity-informed nucleic acid diagnostics | Genomics library
kandi X-RAY | adapt Summary
kandi X-RAY | adapt Summary
The main program for designing assays is design.py.
Support
Quality
Security
License
Reuse
Top functions reviewed by kandi - BETA
- Prepare alignment for a single segment
- Retrieve annotation files from refs_aligned
- Returns the union of a list of kmer leaves
- Extend the set of sequences from other
- Return a list of ligos in a given interval
- Return the weighted weight of seq_ids
- Extract a range from positions_start to pos_end
- Return list of sequences that are bound to the given ligand
- Compute the predicted activity
- Adds metadata to a list of neighbors based on metadata
- Constructs a list of all occurrences of a given species
- Convert argv to arguments
- Construct a sequence of guides at each position
- Curate a sequence of sequences against reference sequences
- Find all guides in a sliding window with a sliding window
- Construct a list of the neighbors of a taxid
- Calculates the binding function for the given position
- Reads taxonomies from a TSV file
- Calculate the requested percentiles
- Query a query
- Find guides with a sliding window
- Finds the representative sequences in a sequence of sequences
- Finds a guide within a given window
- Query the tree
- Run HMC
- Find all oligos in a window
adapt Key Features
adapt Examples and Code Snippets
Community Discussions
Trending Discussions on adapt
QUESTION
I am getting an error in Android Studio to do with my Cursor.
I have the following line in my code
...ANSWER
Answered 2021-Nov-14 at 15:06I had an error like this.
My solution : change method getColumnIndex
into getColumnIndexOrThrow
.
QUESTION
I have been using github actions for quite sometime but today my deployments started failing. Below is the error from github action logs
...ANSWER
Answered 2022-Mar-16 at 07:01First, this error message is indeed expected on Jan. 11th, 2022.
See "Improving Git protocol security on GitHub".
January 11, 2022 Final brownout.
This is the full brownout period where we’ll temporarily stop accepting the deprecated key and signature types, ciphers, and MACs, and the unencrypted Git protocol.
This will help clients discover any lingering use of older keys or old URLs.
Second, check your package.json
dependencies for any git://
URL, as in this example, fixed in this PR.
As noted by Jörg W Mittag:
For GitHub Actions:There was a 4-month warning.
The entire Internet has been moving away from unauthenticated, unencrypted protocols for a decade, it's not like this is a huge surprise.Personally, I consider it less an "issue" and more "detecting unmaintained dependencies".
Plus, this is still only the brownout period, so the protocol will only be disabled for a short period of time, allowing developers to discover the problem.
The permanent shutdown is not until March 15th.
As in actions/checkout issue 14, you can add as a first step:
QUESTION
I have error like this after trying to build my apps in Emulator
/Users/joel/.gradle/caches/transforms-3/06231cc1265260b25a06bafce7a4176f/transformed/core-1.7.0-alpha02/res/values/values.xml:105:5-114:25: AAPT: error: resource android:attr/lStar not found.
I don't know what causes this error. After digging some answer which has similarly error (but in flutter) Problem. But still not solved my issue.
I have this dependency in my project
...ANSWER
Answered 2021-Sep-28 at 17:18I managed to fix this by upgrading compileSdk to 31 and kotlin gradle plugin to 1.5.10
QUESTION
Does NUnit work under Visual Studio 2022? All of the setup instructions I can find relate to previous versions of Visual Studio and reference things that are not present (such as "Tools -> Manage Extensions menu in Visual Studio. Click on Online and enter the search term as NUnit Test Adapter" - the search yields no results). If it does work, how do I set it up?
...ANSWER
Answered 2021-Dec-21 at 10:54You can add both NUnit Framework and NUnit Test Adapter using NuGet Packages.
To do that, right click on your project in Solution Explorer, go to Manage NuGet packages..., in the Browse section type nunit, install NUnit package and the corresponding version adapter (NUnitTestAdapter for NUnit 2.x or NUnit3TestAdapter for NUnit 3.x).
QUESTION
I'm writing web pages in markdown and converting them to HTML using md2html
tool. I want to process the output HTML file and find any youtube link like this:
https://www.youtube.com/watch?v=abcdefgh887
and replace it with the embed code:
I toyed around a little with Grammars, mostly to get familiar with them, but concluded this probably isn't the ideal tool for the job. Plus I'd prefer to use existing modules that are easily adaptable to other similar tasks rather than roll my own half-baked solution.
Perl5 has some good tools for this kind of thing but I'd like to use a pure Raku solution so I can learn more Raku.
Any recommendations for good approaches to this problem?
...ANSWER
Answered 2022-Jan-28 at 20:31I tried to answer your question without knowing an example.
You need to extract youtubeId from A tag and then replace A tag into iframe tag.
pseudo code is:
QUESTION
I'm trying to adapt some layers of existing C++ code to be used by Rust and apparently the way is through a C API.
For example, one function might return a struct as an object
...ANSWER
Answered 2022-Jan-21 at 01:15extern "C"
on both sides + #[repr(C)]
on the Rust side + only using C-compatible types for interfacing between C++ and Rust, should work.
QUESTION
I started with this type for leaf-valued trees with labeled nodes:
...ANSWER
Answered 2021-Dec-18 at 17:02One answer to the linked question mentions adding an extra type parameter, so that instead of Tree (Labeled a)
we use Tree Labeled a
:
QUESTION
I have some text like the following:
...ANSWER
Answered 2021-Dec-21 at 10:12We can try using strsplit
here as follows:
QUESTION
I'm trying to communicate with an OPC DA server and need to write in a tag which is in an array format. We can connect with a simulation server, read tags (int, real, array) and write tags (int, real, str). The problem comes when we need to write in an array tag. The developper of the OpenOPC library (Barry Barnreiter) recommand to use a VARIANT variable because OPC "expect to see a Windows VARIANT structure when writing complex objects such as arrays".
- I did install Pywin32 (build 217) as suggested here.
- I tried to send a simple integer instead of an array in a VARIANT structure.
Here's the code:
...ANSWER
Answered 2021-Dec-05 at 19:56You need to upgrade the python
to 3.9
and Pywin32
to Build 302
. In addition, you need to install the OpenOPC-Python3x 1.3.1
.
QUESTION
When trying to build my android react native app, im getting this error
...ANSWER
Answered 2021-Nov-03 at 08:44For now I know that in my case it is that I have conflict between two manifest files in node_modules folder:
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install adapt
Support
Reuse Trending Solutions
Find, review, and download reusable Libraries, Code Snippets, Cloud APIs from over 650 million Knowledge Items
Find more librariesStay Updated
Subscribe to our newsletter for trending solutions and developer bootcamps
Share this Page