cromwell | Scientific workflow engine designed for simplicity | BPM library

by broadinstitute Scala Version: 85 License: BSD-3-Clause

X-Ray Key Features Code Snippets Community Discussions(3)Vulnerabilities Install Support

kandi X-RAY | cromwell Summary

cromwell is a Scala library typically used in Automation, BPM, Docker applications. cromwell has no bugs, it has no vulnerabilities, it has a Permissive License and it has medium support. You can download it from GitHub.

Cromwell is an open-source Workflow Management System for bioinformatics. Licensing is BSD 3-Clause. The Cromwell documentation has a dedicated site. First time to Cromwell? Get started with Tutorials.

Support

Quality

Security

License

Reuse

Support

cromwell has a medium active ecosystem.

It has 900 star(s) with 331 fork(s). There are 113 watchers for this library.

It had no major release in the last 12 months.

There are 699 open issues and 2091 have been closed. On average issues are closed in 573 days. There are 38 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of cromwell is 85

Quality

cromwell has 0 bugs and 0 code smells.

Security

cromwell has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

cromwell code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

cromwell is licensed under the BSD-3-Clause License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

cromwell releases are available to install and integrate.

It has 166867 lines of code, 10217 functions and 1984 files.

It has medium code complexity. Code complexity directly impacts maintainability of the code.

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cromwell Key Features

No Key Features are available at this moment for cromwell.

cromwell Examples and Code Snippets

No Code Snippets are available at this moment for cromwell.

Community Discussions

Trending Discussions on cromwell

Loop through nested dictionary

How do I tell cromwell and womtool what WDL version to use?

How to extract Key or the first value of JSON parsed object

QUESTION

Loop through nested dictionary

Asked 2021-Nov-29 at 20:05

I have nested dictionary which look like this:

...

ANSWER

Answered 2021-Nov-29 at 16:49

You need to specify orient=records in to_dict():

Source https://stackoverflow.com/questions/70158120

QUESTION

How do I tell cromwell and womtool what WDL version to use?

Asked 2021-Jul-17 at 04:32

I find lots of references to how cromwell supports the development version of WDL. I find people talking about running cromwell using the development version of WDL.

What I can not find anywhere is instructions on how to do this.

For example:

...

ANSWER

Answered 2021-Jul-15 at 10:21

As per the WDL specifications, the WDL version must be indicated in the WDL file itself by putting version on the first line of the file. If this line isn't present then the execution engine should consider the version to be draft-2.

eg.

Source https://stackoverflow.com/questions/68386971

QUESTION

How to extract Key or the first value of JSON parsed object

Asked 2021-Apr-14 at 03:56

I have parsed an object into JSON. When I use the console log, it shows like this.

...

ANSWER

Answered 2021-Apr-14 at 03:56

Let's say your variable is named "myObj", so you'll have:

Source https://stackoverflow.com/questions/67085253

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install cromwell

You can download it from GitHub.

Support

Thinking about contributing to Cromwell? Get started by reading our Contributor Guide. Cromwell has a growing ecosystem of community-backed projects to make your experience even better! Check out our Ecosystem page to learn more.

Find more information at: