vcf2tsv | Genomic VCF to tab-separated values | Genomics library

by sigven Python Version: v0.3.7.1 License: MIT

X-Ray Key Features Code Snippets Community Discussions(1)Vulnerabilities Install Support

kandi X-RAY | vcf2tsv Summary

vcf2tsv is a Python library typically used in Telecommunications, Media, Media, Entertainment, Artificial Intelligence, Genomics applications. vcf2tsv has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. However vcf2tsv build file is not available. You can download it from GitHub.

Genomic VCF to tab-separated values

Support

Quality

Security

License

Reuse

Support

vcf2tsv has a low active ecosystem.

It has 26 star(s) with 10 fork(s). There are 3 watchers for this library.

It had no major release in the last 12 months.

There are 0 open issues and 1 have been closed. On average issues are closed in 14 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of vcf2tsv is v0.3.7.1

Quality

vcf2tsv has no bugs reported.

Security

vcf2tsv has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

vcf2tsv is licensed under the MIT License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

vcf2tsv releases are available to install and integrate.

vcf2tsv has no build file. You will be need to create the build yourself to build the component from source.

Installation instructions, examples and code snippets are available.

Top functions reviewed by kandi - BETA

kandi has reviewed vcf2tsv and discovered the below as its top functions. This is intended to give you an instant insight into vcf2tsv implemented functionality, and help decide if they suit your requirements.

Convert a VCF file to a TSV format .
Main entry point for the command line interface .
Run a subprocess .

Get all kandi verified functions for this library.

vcf2tsv Key Features

No Key Features are available at this moment for vcf2tsv.

vcf2tsv Examples and Code Snippets

No Code Snippets are available at this moment for vcf2tsv.

Community Discussions

Trending Discussions on vcf2tsv

Within each column of a large file, removing everything after a certain delimiter

QUESTION

Within each column of a large file, removing everything after a certain delimiter

Asked 2019-Oct-15 at 16:55

I have a file that consists of many columns which look like this:

...

ANSWER

Answered 2019-Oct-15 at 16:55

With the sample input in the question you can use

Source https://stackoverflow.com/questions/58399140

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install vcf2tsv

Running vcf2tsv requires Python 3. It also requires that you have cyvcf2 and numpy installed. This can be achieved through the use of pip.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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