sinto | Tools for single-cell data processing | Genomics library

by timoast Python Version: Current License: MIT

X-Ray Key Features Code Snippets(1)Community Discussions(3)Vulnerabilities Install Support

kandi X-RAY | sinto Summary

sinto is a Python library typically used in Artificial Intelligence, Genomics applications. sinto has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. However sinto build file is not available. You can install using 'pip install sinto' or download it from GitHub, PyPI.

Tools for single-cell data processing

Support

Quality

Security

License

Reuse

Support

sinto has a low active ecosystem.

It has 79 star(s) with 17 fork(s). There are 2 watchers for this library.

It had no major release in the last 6 months.

There are 3 open issues and 48 have been closed. On average issues are closed in 62 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of sinto is current.

Quality

sinto has 0 bugs and 0 code smells.

Security

sinto has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

sinto code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

sinto is licensed under the MIT License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

sinto releases are not available. You will need to build from source code and install.

Deployable package is available in PyPI.

sinto has no build file. You will be need to create the build yourself to build the component from source.

sinto saves you 549 person hours of effort in developing the same functionality from scratch.

It has 1285 lines of code, 46 functions and 16 files.

It has low code complexity. Code complexity directly impacts maintainability of the code.

Top functions reviewed by kandi - BETA

kandi has reviewed sinto and discovered the below as its top functions. This is intended to give you an instant insight into sinto implemented functionality, and help decide if they suit your requirements.

Extract fragments from a BAM file
Collapse fragments
Create a lookup dictionary from a list of frags
Collapses overlapping fragments
Add barcodes
Add barcodes to fb
Open a fastq file
Get barcodes from a fastq file
Splits a BAM file into chunks
Add start coordinates to bamfile
Find the chromosome breakpoint in the given chromosome
Create tag with tag value
Convert a header line to a string
Builds the RG header
Filter cells in a BAM file
Merge multiple idents

Get all kandi verified functions for this library.

sinto Key Features

No Key Features are available at this moment for sinto.

sinto Examples and Code Snippets

need to end the players turn but instead my code keeps repeating itself infinitely (python)

Python

Lines of Code : 11

License : Strong Copyleft (CC BY-SA 4.0)

Copy

for _ in range(3):
    do something

j = 0
while  j < 3:
    j += 1

jogar = "n"

play = "n"

Community Discussions

Trending Discussions on sinto

Is it possible to use time series without seasonal and cyclical patterns to forecast the future?

Speed up regular expression

Parse log from first occurence to second

QUESTION

Is it possible to use time series without seasonal and cyclical patterns to forecast the future?

Asked 2019-Jul-23 at 08:32

I am trying to analyse a time series(blue one) that looks like this

As you see it's not seasonal I tried to draw the log of this series and it's look like it's not seasonal to ?!

I wonder what's possible to do to forecast the future
log of ts

...

ANSWER

Answered 2019-Jul-23 at 08:25

Your question means "Do I predict variable Y using variable X (X being the time) assuming Y and X are independant". So short answer is no, you can't.

Now, your affirmation that your data is not cyclical seems like jumping to conclusions imo. You might have complex cycles and hidden dependant variables that might explain part of the variance leaving you with more cyclical residuals.

Source https://stackoverflow.com/questions/57159640

QUESTION

Speed up regular expression

Asked 2019-Feb-14 at 13:53

This is a regex to extract the table name from a SQL statement:

...

ANSWER

Answered 2019-Feb-14 at 10:00

Regex optimisation is a very complex topic and should be done with help of some tools. For example, I like Regex101 which calculates for us number of steps Regex engine had to do to match pattern to payload. For your pattern and given example it prints:

Source https://stackoverflow.com/questions/54687151

QUESTION

Parse log from first occurence to second

Asked 2017-Dec-29 at 09:18

I have such logs:

...

ANSWER

Answered 2017-Dec-29 at 09:18

with GNU sed:

Source https://stackoverflow.com/questions/48020007

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install sinto

You can install using 'pip install sinto' or download it from GitHub, PyPI.
You can use sinto like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

Find more information at: