polyester | Bioconductor package polyester , devel version | Genomics library

by alyssafrazee R Version: Current License: No License

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kandi X-RAY | polyester Summary

polyester is a R library typically used in Artificial Intelligence, Genomics applications. polyester has no bugs, it has no vulnerabilities and it has low support. You can download it from GitHub.

Polyester is an R package designed to simulate RNA sequencing experiments with differential transcript expression. Given a set of annotated transcripts, Polyester will simulate the steps of an RNA-seq experiment (fragmentation, reverse-complementing, and sequencing) and produce files containing simulated RNA-seq reads. Simulated reads can be analyzed using your choice of downstream analysis tools. Polyester has a built-in wrapper function to simulate a case/control experiment with differential transcript expression and biological replicates. Users are able to set the levels of differential expression at transcripts of their choosing. This means they know which transcripts are differentially expressed in the simulated dataset, so accuracy of statistical methods for differential expression detection can be analyzed.

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Support

polyester has a low active ecosystem.

It has 76 star(s) with 51 fork(s). There are 9 watchers for this library.

It had no major release in the last 6 months.

There are 22 open issues and 25 have been closed. On average issues are closed in 118 days. There are 6 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of polyester is current.

Quality

polyester has no bugs reported.

Security

polyester has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

polyester does not have a standard license declared.

Check the repository for any license declaration and review the terms closely.

Without a license, all rights are reserved, and you cannot use the library in your applications.

Reuse

polyester releases are not available. You will need to build from source code and install.

Installation instructions, examples and code snippets are available.

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polyester Key Features

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polyester Examples and Code Snippets

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Community Discussions

Trending Discussions on polyester

Regular expression split unexpected empty string item

jQuery getting link from a div class inside multiple divs?

Filter elements between certain patterns r

Use H6 tags to pull part of description down to accordion in HTML block lower down the page

Organize JSON from PHP Loop

Div containing vue app has no elements in it, when it clearly does

Trying to figure out NameError: in Python program

Set PHP variable to value in JSON object

Find max value when string contains alphabets

Json to csharp class failed to deserialize object

QUESTION

Regular expression split unexpected empty string item

Asked 2021-May-11 at 23:29

I have strings like this example

...

ANSWER

Answered 2021-May-11 at 23:29

You can use re.split(r"\s(?=\w+:)", s). I added a lookahead ?= to ensure the split occurs only on the space character that has the \w+: pattern following it.

The original attempt includes the entire pattern in the split group leading to undesirable results (if you include multiple word: groups, you'll see there are bigger problems than just the trailing empty string).

Here's a comparison:

Source https://stackoverflow.com/questions/67495258

QUESTION

jQuery getting link from a div class inside multiple divs?

Asked 2021-Apr-20 at 11:39

I'am trying to get a link from the but somehow I'm getting a weird result.

My expected result is: https://www.trendyol.com/join-us/kadin-somon-bisiklet-yaka-triko-kazak-ju19-20w-cbs-01-p-32897396

What I'am getting is: /search?sxsrf=ALeKk004fBqm96IZaXzZy1RlXkZF6SPc7Q:1618910936715&source=univ&tbm=isch&q=ju19-20w-cbs-01+sari&sa=X&ved=2ahUKEwiO2LiawYzwAhUM-aQKHdarD_sQjJkEegQIBxAB

However, here is the full code:

...

ANSWER

Answered 2021-Apr-20 at 11:35

Try using this CSS selector $(".rso #hlcw0c #g #tF2Cxc #yuRUbf a").attr("href")

Source https://stackoverflow.com/questions/67178014

QUESTION

Filter elements between certain patterns r

Asked 2021-Apr-08 at 18:30

I have a list for which a small reproducible version is provided below:

...

ANSWER

Answered 2021-Apr-08 at 18:30

out <- by(unlist(mainList),
          cumsum(grepl(":", unlist(mainList))),
          function(x) {
            if (grepl("Number.*:", x[1])) x[1] else {
              if (grepl("Conjugate.*:", x[1])) x[-1]
            }
          })

as.list(do.call(c, unname(out)))
# [[1]]
# [1] "Number 1:"
# [[2]]
# [1] "silk"
# [[3]]
# [1] "polyamid"
# [[4]]
# [1] "Number 2:"
# [[5]]
# [1] "nylon"
# [[6]]
# [1] "Number 3:"
# [[7]]
# [1] "polyester"
# [[8]]
# [1] "wool"

Source https://stackoverflow.com/questions/67009394

QUESTION

Use H6 tags to pull part of description down to accordion in HTML block lower down the page

Asked 2021-Feb-28 at 10:59

So, I tried to get the gist of what I'm trying to do in the title, but essentially, I made accordions for our product page and I'm trying to get them to pull some bullet points from the description so that it's different depending on which product page you're on.

I know there are apps that can make tabs and accordions, but once I have the code right, I need to duplicate the product template so that we can apply them to different collections so the images and information on the pages match with the products.

The code attached is in an HTML block on the product page itself and not in the backend code of the store.

Any help is appreciated. Thanks!

...

ANSWER

Answered 2021-Feb-28 at 10:59

Let's say that in product.description there is an h6 tag that you want to pull out.

I will find that the ending and split it out an array which the first part will have

. Then get the content of h6 with another split. send the content to the accordion.

e.g. code is not tested.

Source https://stackoverflow.com/questions/66394138

QUESTION

Organize JSON from PHP Loop

Asked 2021-Jan-11 at 22:30

Good night, i have a file in JSON and I need to organize it by ticket, bringing their subjects from each ticket but I'm not able to do this loop. Can someone help me? I have 25 of these tickets, here and an example of the structure.

...

ANSWER

Answered 2021-Jan-11 at 22:30

$subjects = array();
$json = json_decode($input);
foreach($json as $ticket){
    print_r($ticket->Interactions);
    foreach($ticket->Interactions as $interaction){
        $subjects[] = $interaction->Subject;
    }
}
print_r($subjects);

Source https://stackoverflow.com/questions/65675394

QUESTION

Div containing vue app has no elements in it, when it clearly does

Asked 2020-Dec-07 at 22:17

I've just started learning Vue.js, and I'm following the Vue Mastery beginners course right now. For some reason, my div with id app, contains no elements when I inspect it on Chrome, when clearly it does in my html code. I also found that when I comment the script tag that contains my main JavaScript file, the html elements appear on the page. Please help!

main.js

...

ANSWER

Answered 2020-Dec-07 at 22:17

The app needs to be mounted (oh, I see you're doing this now...):

Source https://stackoverflow.com/questions/65190210

QUESTION

Trying to figure out NameError: in Python program

Asked 2020-Nov-15 at 03:02

Trying to figure out NameError: in python program. The program is supposed to give a user three choices for different types of carpet then prompts them for the height and width. Based on the price of the carpet and what they input for their height and width it should print out the total cost for them. I am getting a NameError saying carpetgrade is not defined. Could anyone check it out and explain why it isnt?

...

ANSWER

Answered 2020-Nov-15 at 03:00

In your if statements, you are checking if the input carpet_selection is equal to polyester, wool, or acrylic. But, I'm assuming you want to check if the user is inputting these actual words (from your image - you entered the word "wool".) You'll need to put these in quotes, because right now, your code is looking to see if the user input is equal to your previously defined variables, which have names polyester, wool, and acrylic. To check for the input being equal to a string, you need to put these words in quotes, since that's the syntax for Python strings.

Since the input will always initially be a string, and your code is checking to see if the input is equal to those variables (which are of type int), none of the conditions will ever evaluate to be true, and thus, carpetgrade will never be defined. So, your if statements should look something like this:

Source https://stackoverflow.com/questions/64840786

QUESTION

Set PHP variable to value in JSON object

Asked 2020-Oct-21 at 03:19

I have a PHP file which gets a JSON object called $response. The $response has many values (as shown below) and I want to extract a few includes title and price. I have tried the below code but it doesnt show ANY result (no error, no value!). Thoughts?

Thank you

PHP code:

...

ANSWER

Answered 2020-Oct-21 at 03:19

The second argument of json_decode function enables associative array result. So in your case you can either do

Source https://stackoverflow.com/questions/64456105

QUESTION

Find max value when string contains alphabets

Asked 2020-Oct-20 at 07:42

I have a string as ('3% Spandex,60% Polyester,7% Cotton,30% Other') and i want to extract the highest value which in this case would be 60% Polyester So I think it will work if I split the string into a list and then strip all numeric values which should enable me to find the position of the max value and find the highest value using that. But this is a lenghty process which I guess would slow me down. Is there any other way to do it?

...

ANSWER

Answered 2020-Oct-20 at 07:42

The following should work:

Source https://stackoverflow.com/questions/64440565

QUESTION

Json to csharp class failed to deserialize object

Asked 2020-Oct-05 at 13:31

Hello i have a problem trying to deserialize a json file to and object i am using NewtonSoft

Here is my json

...

ANSWER

Answered 2020-Oct-05 at 13:31

Because the JavaScript object you have isn't an object, it's an array. So instead of an instance of Root what you have is an instance of List:

Source https://stackoverflow.com/questions/64209584

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