METEORE | Automatic DNA methylation detection from nanopore tools | Genomics library
kandi X-RAY | METEORE Summary
kandi X-RAY | METEORE Summary
METEORE is a R library typically used in Artificial Intelligence, Genomics applications. METEORE has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. You can download it from GitHub.
METEORE provides snakemake pipelines for various tools to detect DNA methylation from Nanopore sequencing reads. Additionally, it provides new predictive models (random forest and multiple linear regression) that combine the outputs from the tools to produce a consensus prediction with higher accuracy than the individual tools.
METEORE provides snakemake pipelines for various tools to detect DNA methylation from Nanopore sequencing reads. Additionally, it provides new predictive models (random forest and multiple linear regression) that combine the outputs from the tools to produce a consensus prediction with higher accuracy than the individual tools.
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METEORE has a low active ecosystem.
It has 29 star(s) with 6 fork(s). There are 9 watchers for this library.
It had no major release in the last 12 months.
There are 2 open issues and 11 have been closed. On average issues are closed in 26 days. There are no pull requests.
It has a neutral sentiment in the developer community.
The latest version of METEORE is v1.0.0
Quality
METEORE has no bugs reported.
Security
METEORE has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
License
METEORE is licensed under the MIT License. This license is Permissive.
Permissive licenses have the least restrictions, and you can use them in most projects.
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METEORE releases are available to install and integrate.
Installation instructions, examples and code snippets are available.
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Currently covering the most popular Java, JavaScript and Python libraries. See a Sample of METEORE
Currently covering the most popular Java, JavaScript and Python libraries. See a Sample of METEORE
METEORE Key Features
No Key Features are available at this moment for METEORE.
METEORE Examples and Code Snippets
No Code Snippets are available at this moment for METEORE.
Community Discussions
Trending Discussions on METEORE
QUESTION
Format XML ordered list with XSLT
Asked 2021-Aug-20 at 11:26
I have the following XML-Snippet …
...ANSWER
Answered 2021-Aug-20 at 11:26Simplified Solution:
Source XML-File:
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install METEORE
We recommend to install software dependencies via Conda on Linux. You can find Miniconda installation instructions for Linux here. Make sure you install the Miniconda Python3 distribution. Accept the license terms during installation. For performance and compatibility reasons you should install Mamba via conda to install Snakemake for each pipeline later. See Snakemake documentation for more details. Once you have installed Conda and Mamba, you can download the Snakemake pipelines and the example datasets.
Support
For any new features, suggestions and bugs create an issue on GitHub.
If you have any questions check and ask questions on community page Stack Overflow .
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