gene_ontology | simple class for working with GO | Genomics library

by princelab Ruby Version: Current License: Non-SPDX

X-Ray Key Features Code Snippets Community Discussions(1)Vulnerabilities Install Support

kandi X-RAY | gene_ontology Summary

gene_ontology is a Ruby library typically used in Artificial Intelligence, Genomics applications. gene_ontology has no bugs, it has no vulnerabilities and it has low support. However gene_ontology has a Non-SPDX License. You can download it from GitHub.

simple class for working with GO (gene ontology); also see Bio::GO classes in bioruby

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Quality

Security

License

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Support

gene_ontology has a low active ecosystem.

It has 6 star(s) with 3 fork(s). There are 2 watchers for this library.

It had no major release in the last 6 months.

There are 0 open issues and 1 have been closed. On average issues are closed in 17 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of gene_ontology is current.

Quality

gene_ontology has no bugs reported.

Security

gene_ontology has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

gene_ontology has a Non-SPDX License.

Non-SPDX licenses can be open source with a non SPDX compliant license, or non open source licenses, and you need to review them closely before use.

Reuse

gene_ontology releases are not available. You will need to build from source code and install.

Installation instructions, examples and code snippets are available.

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gene_ontology Key Features

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gene_ontology Examples and Code Snippets

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Community Discussions

Trending Discussions on gene_ontology

creating mysql table and loading data

QUESTION

creating mysql table and loading data

Asked 2020-May-19 at 08:07

I am facing a problem.

I have this data. The data is stored gene_ontology.txt that was extracted from:http://gala.bx.psu.edu/downloads/hg15/genes/ In this data, in the second column there are multiple strings, "-", ",", and whitespaces between strings and numbers as well.

TO EXAMPLE THE DATA:

...

ANSWER

Answered 2020-May-19 at 08:07

The problem seems to be with the comma "," in-between second column's text.

Try to load the complete file as fixed width into a single column in TableA. Then use substr() to put the first field in the second table TableB's column1, while the 2nd field into column2.

This may load the data and you can analyze the data further to improve loading process.

Source https://stackoverflow.com/questions/61691009

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install gene_ontology

Add this line to your application's Gemfile:.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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