mango | Apache | Genomics library

 by   bigdatagenomics Scala Version: Current License: Apache-2.0

kandi X-RAY | mango Summary

kandi X-RAY | mango Summary

mango is a Scala library typically used in Artificial Intelligence, Genomics applications. mango has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. You can download it from GitHub.

Mango is a scalable genomics visualization tool built on top of the ADAM genomics processing engine. Apache 2 licensed. Mango consists of a notebook and browser form factor, allowing users to visualize reads, variants, and features in a GUI or programmable interface. The Mango tools use Pileup.js for interactive scrolling at genomic loci.
Support
    Quality
      Security
        License
          Reuse

            kandi-support Support

              mango has a low active ecosystem.
              It has 117 star(s) with 30 fork(s). There are 10 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 57 open issues and 127 have been closed. On average issues are closed in 256 days. There are 7 open pull requests and 0 closed requests.
              It has a neutral sentiment in the developer community.
              The latest version of mango is current.

            kandi-Quality Quality

              mango has no bugs reported.

            kandi-Security Security

              mango has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              mango is licensed under the Apache-2.0 License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              mango releases are not available. You will need to build from source code and install.
              Installation instructions, examples and code snippets are available.

            Top functions reviewed by kandi - BETA

            kandi's functional review helps you automatically verify the functionalities of the libraries and avoid rework.
            Currently covering the most popular Java, JavaScript and Python libraries. See a Sample of mango
            Get all kandi verified functions for this library.

            mango Key Features

            No Key Features are available at this moment for mango.

            mango Examples and Code Snippets

            No Code Snippets are available at this moment for mango.

            Community Discussions

            QUESTION

            How to show recyclerview items in time interval?
            Asked 2021-Jun-14 at 14:28

            I want to display recyclerview items after every 10 seconds. For instance, I have 8 items in my arraylist. Initially I want to display 3 items, then after waiting for 10 seconds first three visible items will disappear and next 3 items will show. how to achieve it ?

            ...

            ANSWER

            Answered 2021-Jun-14 at 14:12

            Interesting scenario. I think instead of adding time delays in adapter you should do that stuff in your class where you are passing data to adapter. Try to load first 3 items which you want to show then use handler to make delay of 10 seconds.

            Like this :

            Source https://stackoverflow.com/questions/67971626

            QUESTION

            Make this javascript random word generator work on many divs within the same document, from the same single array, onclick event
            Asked 2021-Jun-13 at 22:13

            This is not a Duplicate question, I spent 3 days searching here and there is no other question similar to mine!

            This javascript generates random words only when called from one single div, or the first one when trying different DOM Methods to get Elements.

            I've tried several options and combinations with getElementsBy ID, Tag, Name, Class, and CSS Selector.

            However after several days searching and testing, I can't make it work in more than one div.

            I need to use the same array as the only source for all my 36 divs, to generate random words from an onClick event on each of them.

            I'm open to edit it, or completely change it.

            This is what I have currently working for the first div using getElementsByClassName which I suppose should be the correct way as I need to call this script from several elements, not just one:

            ...

            ANSWER

            Answered 2021-Jun-13 at 21:11

            You can create a loop to add the click handler to all fruits

            Source https://stackoverflow.com/questions/67962647

            QUESTION

            JavaScript cumulative sum and list all elements based on two condition
            Asked 2021-Jun-13 at 09:04

            I am new to JavaScript, can anyone try to solve this please thanks in advance

            Sample input

            ...

            ANSWER

            Answered 2021-Jun-13 at 06:09

            This would do it in place assuming each set of items were in order If the item is the same as the previous item, sum:

            Using for

            Source https://stackoverflow.com/questions/67952160

            QUESTION

            Count records filtered by a field in a struct (nested and repeated column) in BigQuery
            Asked 2021-Jun-11 at 16:55

            I have such data structure in BigQuery:

            ...

            ANSWER

            Answered 2021-Jun-11 at 16:55

            QUESTION

            Reading a List of tuples of str, bool from json into a class
            Asked 2021-Jun-10 at 13:25

            I am trying to create a class that can be use to serialize and deserialize JSON. One of the elements that I need to represent is a list of pairs where the first is a string and the second is a boolean. The class should read/write the following JSON snippet:

            ...

            ANSWER

            Answered 2021-Jun-10 at 13:25

            You need typing.Dict

            Ex:

            Source https://stackoverflow.com/questions/67922016

            QUESTION

            How to update selected item in the proper PyQt5 QLineEdit?
            Asked 2021-Jun-09 at 16:51

            How to update the selected item in the proper QLineEdit? 3 textboxes and filled by various sets of data. If I click some items in QListWidget, every time first QLineedit only updated. Instead of this, I want to update data to the corresponding QLineEdits. ( for Ex: if textbox1 is focused, then the selected item will update in textbox1. If textbox2 is focused, then the selected item will update in textbox2). But In My case, Every time textbox1 is only updated.

            ...

            ANSWER

            Answered 2021-Jun-09 at 16:51

            You are passing the same instance of same listbox again and agian to MyFile constructor, and connecting the listBox clicked signal again and again, but connecting the signal works for the first time only, so you need to disconnect if it is already connected, so first try to disconnect the signal if it is connected:

            Source https://stackoverflow.com/questions/67908344

            QUESTION

            How to fetch the data from next column in a dataframe
            Asked 2021-Jun-09 at 13:38

            I want to fetch the data of the column "Examples" with respect to column " Category"

            ...

            ANSWER

            Answered 2021-Jun-09 at 13:38

            If I understood correct, you want to unpack each list that contains a few lists in the Example column.

            One way is to use numpy's ravel function. Assuming your dataframe is df:

            Source https://stackoverflow.com/questions/67903185

            QUESTION

            Kotlin Crashs JSON
            Asked 2021-Jun-08 at 07:30

            I have the body of the JSON returning to the following however it keeps crashing.

            ...

            ANSWER

            Answered 2021-Jun-08 at 07:30

            In your sample JSON the value of track is an Object. In DataP track is a List.

            Should it be class DataP(val track: NowPlayingTrack) instead?

            Source https://stackoverflow.com/questions/67882359

            QUESTION

            Finding similar phases
            Asked 2021-Jun-06 at 21:02

            How can I find similar phases within a large list of phases (i.e. tweets, or movie reviews)?

            For example, 'I like chocolate' is similar to 'I like chocolate bar' and 'I like mango'; same as 'I ate apple' vs 'I ate apples'.

            ...

            ANSWER

            Answered 2021-Jun-06 at 01:56

            Try with soundex from jellyfish,same output should have similar phases

            Source https://stackoverflow.com/questions/67855032

            QUESTION

            Filtering or removing array objects from the DTO class object based on an another list in .net
            Asked 2021-Jun-05 at 16:46

            I have below code :

            ...

            ANSWER

            Answered 2021-Jun-02 at 16:47

            No sure if I am missing something here but isn't this a fairly simple ForEeach loop?

            Source https://stackoverflow.com/questions/67808748

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install mango

            The Mango tools are published to Maven central. Corresponding python modules are published to Pypi. Readthedocs provides instructions on how to install the Mango tools from the most recent distribution.
            Instructions for running the Mango tools from source can be found at readthedocs. You will need to have Maven installed in order to build mango. Mango browser also requires npm > 3.10.10. Note: The default configuration is for Hadoop 2.7.3. If building against a different version of Hadoop, please edit the build configuration in the <properties> section of the pom.xml file. If using the Mango notebook, we recommend setting up a virtual environment to install required python modules. To configure your python environment for the Mango notebook, refer to instructions for Building for Python.

            Support

            Mango documentation is hosted at readthedocs. Documentation for Mango includes instructions for running the Mango notebook and the Mango browser locally, remotely, and in the cloud (Amazon EMR and Google Cloud Engine). Documentation also provides Python API documentation for the Mango notebook.
            Find more information at:

            Find, review, and download reusable Libraries, Code Snippets, Cloud APIs from over 650 million Knowledge Items

            Find more libraries
            CLONE
          • HTTPS

            https://github.com/bigdatagenomics/mango.git

          • CLI

            gh repo clone bigdatagenomics/mango

          • sshUrl

            git@github.com:bigdatagenomics/mango.git

          • Stay Updated

            Subscribe to our newsletter for trending solutions and developer bootcamps

            Agree to Sign up and Terms & Conditions

            Share this Page

            share link

            Explore Related Topics

            Consider Popular Genomics Libraries

            Try Top Libraries by bigdatagenomics

            adam

            by bigdatagenomicsScala

            avocado

            by bigdatagenomicsScala

            bdg-formats

            by bigdatagenomicsShell

            cannoli

            by bigdatagenomicsScala

            eggo

            by bigdatagenomicsPython